RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 MGARPQ8TDB4 240 aa4.95□□□□□ -1.62
SKP1-211ENST00000523359 SGCDQ92629 289 aa4.95□□□□□ -1.62
SKP1-211ENST00000523359 RND1Q92730 232 aa4.95□□□□□ -1.62
SKP1-211ENST00000523359 MIB2Q96AX9 1013 aa4.95□□□□□ -1.62
SKP1-211ENST00000523359 FAM120BQ96EK7 910 aaKnown RBP4.95□□□□□ -1.62
SKP1-211ENST00000523359 ELMOD3Q96FG2 381 aa4.95□□□□□ -1.62
SKP1-211ENST00000523359 METTL2AQ96IZ6 378 aaKnown RBP4.95□□□□□ -1.62
SKP1-211ENST00000523359 JAKMIP1Q96N16 626 aaKnown RBP4.95□□□□□ -1.62
SKP1-211ENST00000523359 ACOX2Q99424 681 aa4.95□□□□□ -1.62
SKP1-211ENST00000523359 WACQ9BTA9 647 aa4.95□□□□□ -1.62
SKP1-211ENST00000523359 MMTAG2Q9BU76 263 aaKnown RBP4.95□□□□□ -1.62
SKP1-211ENST00000523359 EDEM3Q9BZQ6 932 aa4.95□□□□□ -1.62
SKP1-211ENST00000523359 HOXC10Q9NYD6 342 aa4.95□□□□□ -1.62
SKP1-211ENST00000523359 AGTPBP1Q9UPW5 1226 aa4.95□□□□□ -1.62
SKP1-211ENST00000523359 R3HDM2Q9Y2K5 976 aaKnown RBP4.95□□□□□ -1.62
SKP1-211ENST00000523359 ZNF711Q9Y462 761 aa4.95□□□□□ -1.62
SKP1-211ENST00000523359 SESN1Q9Y6P5 492 aa4.95□□□□□ -1.62
SKP1-211ENST00000523359 hCG_1807616A0A1W2PRN6 198 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 FAM25EA8MYX2 175 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 HCRTR2O43614 444 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 NDUFS7O75251 213 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 GJB3O75712 270 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 GOSR1O95249 250 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 SCG2P13521 617 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 HOXB6P17509 224 aaKnown RBP4.94□□□□□ -1.62
SKP1-211ENST00000523359 GABRB1P18505 474 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 PSMB10P40306 273 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 ALDH3A2P51648 485 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 POLGP54098 1239 aaPredicted RBP4.94□□□□□ -1.62
SKP1-211ENST00000523359 BNC1Q01954 994 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 IRF3Q14653 427 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 WTAPQ15007 396 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 TNIP1Q15025 636 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 ASTE1Q2TB18 679 aaPredicted RBP4.94□□□□□ -1.62
SKP1-211ENST00000523359 PPP6R3Q5H9R7 873 aaPredicted RBP4.94□□□□□ -1.62
SKP1-211ENST00000523359 EFHC1Q5JVL4 640 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 PAPPA-AS1Q5QFB9 102 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 LRIF1Q5T3J3 769 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 C8orf82Q6P1X6 216 aaPredicted RBP4.94□□□□□ -1.62
SKP1-211ENST00000523359 CLEC17AQ6ZS10 378 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 TICAM1Q8IUC6 712 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 FOXRED2Q8IWF2 684 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 RPAP2Q8IXW5 612 aaPredicted RBP4.94□□□□□ -1.62
SKP1-211ENST00000523359 ADGRF2Q8IZF7 708 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 CCAR2Q8N163 923 aaKnown RBP4.94□□□□□ -1.62
SKP1-211ENST00000523359 ZNF619Q8N2I2 560 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 SRBD1Q8N5C6 995 aaKnown RBP4.94□□□□□ -1.62
SKP1-211ENST00000523359 B4GALNT2Q8NHY0 566 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 KXD1Q9BQD3 176 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 MMP25Q9NPA2 562 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 SETD4Q9NVD3 440 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 CPSF2Q9P2I0 782 aaKnown RBP4.94□□□□□ -1.62
SKP1-211ENST00000523359 TINAGQ9UJW2 476 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 TTC7AQ9ULT0 858 aaPredicted RBP4.94□□□□□ -1.62
SKP1-211ENST00000523359 MTF2Q9Y483 593 aaPredicted RBP4.94□□□□□ -1.62
SKP1-211ENST00000523359 FLT1P17948 1338 aa4.94□□□□□ -1.62
SKP1-211ENST00000523359 H0Y626 953 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 H3BQ06 376 aaPredicted RBP4.93□□□□□ -1.62
SKP1-211ENST00000523359 SOCS6O14544 535 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 KCNJ13O60928 360 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 JRKO75564 520 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 BBOX1O75936 387 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 TPPPO94811 219 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 GLUD1P00367 558 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 SLC4A1P02730 911 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 RB1P06400 928 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 NR2F1P10589 423 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 PORP16435 677 aaPredicted RBP4.93□□□□□ -1.62
SKP1-211ENST00000523359 DDX5P17844 614 aaKnown RBP4.93□□□□□ -1.62
SKP1-211ENST00000523359 ATP5DP30049 168 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 SSR1P43307 286 aaKnown RBP4.93□□□□□ -1.62
SKP1-211ENST00000523359 GLUD2P49448 558 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 HTR6P50406 440 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 RAD23BP54727 409 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 IFI35P80217 286 aaPredicted RBP4.93□□□□□ -1.62
SKP1-211ENST00000523359 DDR1Q08345 913 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 DHX34Q14147 1143 aaKnown RBP4.93□□□□□ -1.62
SKP1-211ENST00000523359 ADIPOQQ15848 244 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 FAM69BQ5VUD6 431 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 SIGIRRQ6IA17 410 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 JADE1Q6IE81 842 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 IRGCQ6NXR0 463 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 SLC36A4Q6YBV0 504 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 SLC9B2Q86UD5 537 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 C17orf53Q8N3J3 647 aaPredicted RBP4.93□□□□□ -1.62
SKP1-211ENST00000523359 AVL9Q8NBF6 648 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 HJURPQ8NCD3 748 aaPredicted RBP4.93□□□□□ -1.62
SKP1-211ENST00000523359 WASF1Q92558 559 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 ANP32BQ92688 251 aaKnown RBP4.93□□□□□ -1.62
SKP1-211ENST00000523359 SPATA17Q96L03 361 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 SH3GL2Q99962 352 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 SRSF8Q9BRL6 282 aaKnown RBP4.93□□□□□ -1.62
SKP1-211ENST00000523359 NTPCRQ9BSD7 190 aaKnown RBP4.93□□□□□ -1.62
SKP1-211ENST00000523359 TRIM6Q9C030 488 aaPredicted RBP4.93□□□□□ -1.62
SKP1-211ENST00000523359 OR10A4Q9H209 315 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 PLK3Q9H4B4 646 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 C17orf75Q9HAS0 396 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 NOX4Q9NPH5 578 aa4.93□□□□□ -1.62
SKP1-211ENST00000523359 ACSS1Q9NUB1 689 aaPredicted RBP4.93□□□□□ -1.62
SKP1-211ENST00000523359 FBXL17Q9UF56 701 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms