RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 MSLNQ13421 630 aaPredicted RBP16.22■□□□□ 0.19
PABPC1-221ENST00000522720 SPARCL1Q14515 664 aa16.22■□□□□ 0.19
PABPC1-221ENST00000522720 TAF1AQ15573 450 aaPredicted RBP16.22■□□□□ 0.19
PABPC1-221ENST00000522720 P3H1Q32P28 736 aa16.22■□□□□ 0.19
PABPC1-221ENST00000522720 ATP13A5Q4VNC0 1218 aa16.22■□□□□ 0.19
PABPC1-221ENST00000522720 ADGRG6Q86SQ4 1221 aa16.22■□□□□ 0.19
PABPC1-221ENST00000522720 BRSK1Q8TDC3 778 aa16.22■□□□□ 0.19
PABPC1-221ENST00000522720 ZCCHC14Q8WYQ9 949 aaKnown RBP16.22■□□□□ 0.19
PABPC1-221ENST00000522720 CCDC74AQ96AQ1 378 aa16.22■□□□□ 0.19
PABPC1-221ENST00000522720 DEPDC7Q96QD5 511 aa16.22■□□□□ 0.19
PABPC1-221ENST00000522720 TBL1YQ9BQ87 522 aa16.22■□□□□ 0.19
PABPC1-221ENST00000522720 NRSN2Q9GZP1 204 aa16.22■□□□□ 0.19
PABPC1-221ENST00000522720 OR2AG1Q9H205 316 aa16.22■□□□□ 0.19
PABPC1-221ENST00000522720 CCDC86Q9H6F5 360 aaKnown RBP16.22■□□□□ 0.19
PABPC1-221ENST00000522720 ARFGAP3Q9NP61 516 aa16.22■□□□□ 0.19
PABPC1-221ENST00000522720 DKK4Q9UBT3 224 aa16.22■□□□□ 0.19
PABPC1-221ENST00000522720 FEZ2Q9UHY8 353 aaPredicted RBP16.22■□□□□ 0.19
PABPC1-221ENST00000522720 RABGEF1Q9UJ41 708 aa16.22■□□□□ 0.19
PABPC1-221ENST00000522720 APPL1Q9UKG1 709 aa16.22■□□□□ 0.19
PABPC1-221ENST00000522720 TMPRSS11EQ9UL52 423 aa16.22■□□□□ 0.19
PABPC1-221ENST00000522720 PRKAB1Q9Y478 270 aa16.22■□□□□ 0.19
PABPC1-221ENST00000522720 FREM2Q5SZK8 3169 aa16.22■□□□□ 0.19
PABPC1-221ENST00000522720 KMT2BQ9UMN6 2715 aaPredicted RBP16.22■□□□□ 0.19
PABPC1-221ENST00000522720 WDFY3Q8IZQ1 3526 aa16.22■□□□□ 0.19
PABPC1-221ENST00000522720 COL27A1Q8IZC6 1860 aaPredicted RBP16.21■□□□□ 0.19
PABPC1-221ENST00000522720 C2orf81A6NN90 581 aa16.21■□□□□ 0.19
PABPC1-221ENST00000522720 GPR89AB7ZAQ6 455 aa16.21■□□□□ 0.19
PABPC1-221ENST00000522720 STX7O15400 261 aaKnown RBP16.21■□□□□ 0.19
PABPC1-221ENST00000522720 PSMD3O43242 534 aa16.21■□□□□ 0.19
PABPC1-221ENST00000522720 GRID2O43424 1007 aa16.21■□□□□ 0.19
PABPC1-221ENST00000522720 NUDT21O43809 227 aaKnown RBP16.21■□□□□ 0.19
PABPC1-221ENST00000522720 VEGFDO43915 354 aa16.21■□□□□ 0.19
PABPC1-221ENST00000522720 USP12O75317 370 aa16.21■□□□□ 0.19
PABPC1-221ENST00000522720 TCEA3O75764 348 aa16.21■□□□□ 0.19
PABPC1-221ENST00000522720 GPR89BP0CG08 455 aa16.21■□□□□ 0.19
PABPC1-221ENST00000522720 SPAM1P38567 509 aa16.21■□□□□ 0.19
PABPC1-221ENST00000522720 CYP4F3Q08477 520 aa16.21■□□□□ 0.19
PABPC1-221ENST00000522720 RTP5Q14D33 572 aa16.21■□□□□ 0.19
PABPC1-221ENST00000522720 SIX1Q15475 284 aaPredicted RBP16.21■□□□□ 0.19
PABPC1-221ENST00000522720 CHRNA6Q15825 494 aa16.21■□□□□ 0.19
PABPC1-221ENST00000522720 CCNG2Q16589 344 aa16.21■□□□□ 0.19
PABPC1-221ENST00000522720 ZNF648Q5T619 568 aaPredicted RBP16.21■□□□□ 0.19
PABPC1-221ENST00000522720 CHST15Q7LFX5 561 aaPredicted RBP16.21■□□□□ 0.19
PABPC1-221ENST00000522720 PHYKPLQ8IUZ5 450 aa16.21■□□□□ 0.19
PABPC1-221ENST00000522720 LRIT1Q9P2V4 623 aa16.21■□□□□ 0.19
PABPC1-221ENST00000522720 ZMIZ1Q9ULJ6 1067 aa16.21■□□□□ 0.19
PABPC1-221ENST00000522720 ZNF148Q9UQR1 794 aa16.21■□□□□ 0.19
PABPC1-221ENST00000522720 ARL5AQ9Y689 179 aa16.21■□□□□ 0.19
PABPC1-221ENST00000522720 RNF215Q9Y6U7 377 aa16.21■□□□□ 0.19
PABPC1-221ENST00000522720 URB1O60287 2271 aaKnown RBP16.2■□□□□ 0.18
PABPC1-221ENST00000522720 GLYATL1P3A0A0U1RQE8 302 aa16.2■□□□□ 0.18
PABPC1-221ENST00000522720 NTN3O00634 580 aaPredicted RBP16.2■□□□□ 0.18
PABPC1-221ENST00000522720 GAPDHSO14556 408 aaPredicted RBP16.2■□□□□ 0.18
PABPC1-221ENST00000522720 CHUKO15111 745 aa16.2■□□□□ 0.18
PABPC1-221ENST00000522720 CASC3O15234 703 aaKnown RBP16.2■□□□□ 0.18
PABPC1-221ENST00000522720 CSO75390 466 aaKnown RBP16.2■□□□□ 0.18
PABPC1-221ENST00000522720 ECEL1O95672 775 aa16.2■□□□□ 0.18
PABPC1-221ENST00000522720 SNX1Q13596 522 aa16.2■□□□□ 0.18
PABPC1-221ENST00000522720 PTPRCAPQ14761 206 aa16.2■□□□□ 0.18
PABPC1-221ENST00000522720 ISXQ2M1V0 245 aa16.2■□□□□ 0.18
PABPC1-221ENST00000522720 KHDC1Q4VXA5 237 aaKnown RBP16.2■□□□□ 0.18
PABPC1-221ENST00000522720 DRICH1Q6PGQ1 229 aaPredicted RBP16.2■□□□□ 0.18
PABPC1-221ENST00000522720 FAM151BQ6UXP7 276 aa16.2■□□□□ 0.18
PABPC1-221ENST00000522720 RBM44Q6ZP01 1051 aaKnown RBP16.2■□□□□ 0.18
PABPC1-221ENST00000522720 NAGSQ8N159 534 aa16.2■□□□□ 0.18
PABPC1-221ENST00000522720 ARL14Q8N4G2 192 aa16.2■□□□□ 0.18
PABPC1-221ENST00000522720 OR4K2Q8NGD2 314 aa16.2■□□□□ 0.18
PABPC1-221ENST00000522720 MDM1Q8TC05 714 aa16.2■□□□□ 0.18
PABPC1-221ENST00000522720 MAIP1Q8WWC4 291 aa16.2■□□□□ 0.18
PABPC1-221ENST00000522720 GRAMD1AQ96CP6 724 aa16.2■□□□□ 0.18
PABPC1-221ENST00000522720 LRRC40Q9H9A6 602 aa16.2■□□□□ 0.18
PABPC1-221ENST00000522720 ZKSCAN5Q9Y2L8 839 aa16.2■□□□□ 0.18
PABPC1-221ENST00000522720 CEP104O60308 925 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 UGT1A9O60656 530 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 MTX2O75431 263 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 CDK14O94921 469 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 CRTAMO95727 393 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 AP2A1O95782 977 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 IFNB1P01574 187 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 FGGP02679 453 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 ACP5P13686 325 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 UGT1A6P19224 532 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 UGT1A1P22309 533 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 UGT1A4P22310 534 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 CXCR5P32302 372 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 UGT1A3P35503 534 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 UGT1A5P35504 534 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 MAZP56270 477 aaKnown RBP16.19■□□□□ 0.18
PABPC1-221ENST00000522720 CCL7P80098 99 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 PDE1BQ01064 536 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 ITGA9Q13797 1035 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 SPIDRQ14159 915 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 ZNF438Q7Z4V0 828 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 PROSER1Q86XN7 944 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 CCNJLQ8IV13 435 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 REXO1L1PQ8IX06 675 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 PATE1Q8WXA2 126 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 NXPE2Q96DL1 559 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 C19orf43Q9BQ61 176 aa16.19■□□□□ 0.18
PABPC1-221ENST00000522720 KCNF1Q9H3M0 494 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms