RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 MCFD2Q8NI22 146 aa9.56□□□□□ -0.88
CTNNA1-230ENST00000521724 CLEC4CQ8WTT0 213 aa9.56□□□□□ -0.88
CTNNA1-230ENST00000521724 FIG4Q92562 907 aa9.56□□□□□ -0.88
CTNNA1-230ENST00000521724 TMEM125Q96AQ2 219 aa9.56□□□□□ -0.88
CTNNA1-230ENST00000521724 NT5C1AQ9BXI3 368 aa9.56□□□□□ -0.88
CTNNA1-230ENST00000521724 SLIRPQ9GZT3 109 aaKnown RBP9.56□□□□□ -0.88
CTNNA1-230ENST00000521724 MIR1-1HGQ9H1L0 117 aa9.56□□□□□ -0.88
CTNNA1-230ENST00000521724 RPF1Q9H9Y2 349 aaKnown RBP9.56□□□□□ -0.88
CTNNA1-230ENST00000521724 SPON1Q9HCB6 807 aa9.56□□□□□ -0.88
CTNNA1-230ENST00000521724 IL37Q9NZH6 218 aa9.56□□□□□ -0.88
CTNNA1-230ENST00000521724 GIMAP2Q9UG22 337 aa9.56□□□□□ -0.88
CTNNA1-230ENST00000521724 SATB2Q9UPW6 733 aa9.56□□□□□ -0.88
CTNNA1-230ENST00000521724 GPSM3Q9Y4H4 160 aa9.56□□□□□ -0.88
CTNNA1-230ENST00000521724 PARP14Q460N5 1801 aa9.56□□□□□ -0.88
CTNNA1-230ENST00000521724 ANK1P16157 1881 aa9.56□□□□□ -0.88
CTNNA1-230ENST00000521724 SAGE2PA6NJ88 616 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 UBXN8O00124 270 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 UBFD1O14562 309 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 ZBTB24O43167 697 aaPredicted RBP9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 B4GALT5O43286 388 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 PTTG1O95997 202 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 IL31Q6EBC2 164 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 MPZL3Q6UWV2 235 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 STRADAQ7RTN6 431 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 DCP1BQ8IZD4 617 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 AGBL3Q8NEM8 1001 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 FAR1Q8WVX9 515 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 CENPIQ92674 756 aaPredicted RBP9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 PROX1Q92786 737 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 BHMTQ93088 406 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 HPDLQ96IR7 371 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 ZNF560Q96MR9 790 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 C2orf40Q9H1Z8 148 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 CDHR5Q9HBB8 845 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 PAK1IP1Q9NWT1 392 aaPredicted RBP9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 PNMA8BQ9ULN7 279 aaPredicted RBP9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 EIF3LQ9Y262 564 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 UGT2A1Q9Y4X1 527 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 SHROOM3Q8TF72 1996 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 LCTP09848 1927 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 A0A087X1B8 175 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 ERI2A8K979 691 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 PDZK1P1A8MUH7 402 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 G3V2T6 193 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 H0Y626 953 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 H3BMM5 538 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 UPK1AO00322 258 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 CCRL2O00421 344 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 NOBOXO60393 691 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 TRIM16O95361 564 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 FYNP06241 537 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 ABCB1P08183 1280 aaPredicted RBP9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 SPNP16150 400 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 FSHRP23945 695 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 PIGAP37287 484 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 SNX16P57768 344 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 RACK1P63244 317 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 CCNA1P78396 465 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 FOXM1Q08050 763 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 GALNT1Q10472 559 aaPredicted RBP9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 EPS8Q12929 822 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 ACAP2Q15057 778 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 TARBP2Q15633 366 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 CRY1Q16526 586 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 EEF1DP3Q658K8 133 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 JADE1Q6IE81 842 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 CCBE1Q6UXH8 406 aaPredicted RBP9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 CCDC81Q6ZN84 652 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 RBM23Q86U06 439 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 GATAD2AQ86YP4 633 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 ZBTB8OSQ8IWT0 167 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 BPIFB1Q8TDL5 484 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 RNF139Q8WU17 664 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 RNF34Q969K3 372 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 SLC39A13Q96H72 371 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 CDHR1Q96JP9 859 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 TMEM74Q96NL1 305 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 DEPDC7Q96QD5 511 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 SNX18Q96RF0 628 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 EPS8L2Q9H6S3 715 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 SMURF2Q9HAU4 748 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 MRM3Q9HC36 420 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 SETD4Q9NVD3 440 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 RCOR3Q9P2K3 495 aaPredicted RBP9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 KIAA1257Q9ULG3 409 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 PTGDR2Q9Y5Y4 395 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 PCM1Q15154 2024 aa9.55□□□□□ -0.88
CTNNA1-230ENST00000521724 SYNJ2BP-COX16A0A087WUM0 186 aa9.54□□□□□ -0.88
CTNNA1-230ENST00000521724 XPNPEP2O43895 674 aa9.54□□□□□ -0.88
CTNNA1-230ENST00000521724 KPNA6O60684 536 aa9.54□□□□□ -0.88
CTNNA1-230ENST00000521724 ICMTO60725 284 aa9.54□□□□□ -0.88
CTNNA1-230ENST00000521724 CYP2B6P20813 491 aa9.54□□□□□ -0.88
CTNNA1-230ENST00000521724 PSMB9P28065 219 aa9.54□□□□□ -0.88
CTNNA1-230ENST00000521724 MTHFRP42898 656 aa9.54□□□□□ -0.88
CTNNA1-230ENST00000521724 POLD2P49005 469 aa9.54□□□□□ -0.88
CTNNA1-230ENST00000521724 TUFMP49411 452 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-230ENST00000521724 CDH17Q12864 832 aa9.54□□□□□ -0.88
CTNNA1-230ENST00000521724 TECRLQ5HYJ1 363 aa9.54□□□□□ -0.88
CTNNA1-230ENST00000521724 COLEC12Q5KU26 742 aa9.54□□□□□ -0.88
CTNNA1-230ENST00000521724 AGAP9Q5VTM2 703 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms