RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 TMEM174Q8WUU8 243 aa4.42□□□□□ -1.7
CALCOCO2-208ENST00000506971 WDR60Q8WVS4 1066 aa4.42□□□□□ -1.7
CALCOCO2-208ENST00000506971 MRPS27Q92552 414 aaKnown RBP4.42□□□□□ -1.7
CALCOCO2-208ENST00000506971 LPAR1Q92633 364 aa4.42□□□□□ -1.7
CALCOCO2-208ENST00000506971 FAM162AQ96A26 154 aa4.42□□□□□ -1.7
CALCOCO2-208ENST00000506971 PGAP3Q96FM1 320 aaPredicted RBP4.42□□□□□ -1.7
CALCOCO2-208ENST00000506971 ZNF419Q96HQ0 510 aaPredicted RBP4.42□□□□□ -1.7
CALCOCO2-208ENST00000506971 NR1H4Q96RI1 486 aaPredicted RBP4.42□□□□□ -1.7
CALCOCO2-208ENST00000506971 BRD8Q9H0E9 1235 aa4.42□□□□□ -1.7
CALCOCO2-208ENST00000506971 RBM38Q9H0Z9 239 aaKnown RBP4.42□□□□□ -1.7
CALCOCO2-208ENST00000506971 SLC25A18Q9H1K4 315 aa4.42□□□□□ -1.7
CALCOCO2-208ENST00000506971 RNF41Q9H4P4 317 aaPredicted RBP4.42□□□□□ -1.7
CALCOCO2-208ENST00000506971 VEZTQ9HBM0 779 aa4.42□□□□□ -1.7
CALCOCO2-208ENST00000506971 FZD3Q9NPG1 666 aa4.42□□□□□ -1.7
CALCOCO2-208ENST00000506971 MRPL15Q9P015 296 aaKnown RBP4.42□□□□□ -1.7
CALCOCO2-208ENST00000506971 ANAPC5Q9UJX4 755 aa4.42□□□□□ -1.7
CALCOCO2-208ENST00000506971 NFU1Q9UMS0 254 aa4.42□□□□□ -1.7
CALCOCO2-208ENST00000506971 MYH6P13533 1939 aa4.42□□□□□ -1.7
CALCOCO2-208ENST00000506971 CASZ1Q86V15 1759 aa4.42□□□□□ -1.7
CALCOCO2-208ENST00000506971 ROBO1Q9Y6N7 1651 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 MYH2Q9UKX2 1941 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 FAM90A20PA6NIJ5 464 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 A6NNC1 897 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 BECN2A8MW95 431 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 M0QZQ0 153 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 MPHOSPH10O00566 681 aaKnown RBP4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 NDC80O14777 642 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 TNPO2O14787 897 aaKnown RBP4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 SYNCRIPO60506 623 aaKnown RBP4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 PPP6R2O75170 966 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 KRT10P13645 584 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 CDH2P19022 906 aaPredicted RBP4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 GP5P40197 560 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 ZNF84P51523 738 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 P2RX3P56373 397 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 RBM6P78332 1123 aaKnown RBP4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 TBL3Q12788 808 aaKnown RBP4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 PGM5Q15124 567 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 ALX1Q15699 326 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 NFIL3Q16649 462 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 ERMARDQ5T6L9 678 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 PET117Q6UWS5 81 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 CRELD2Q6UXH1 353 aaPredicted RBP4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 SYNE3Q6ZMZ3 975 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 METTL23Q86XA0 190 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 PLA2G4DQ86XP0 818 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 SCML4Q8N228 414 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 NECAB1Q8N987 351 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 CCDC112Q8NEF3 446 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 GSDMBQ8TAX9 411 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 SPATA18Q8TC71 538 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 UTP15Q8TED0 518 aaKnown RBP4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 GRK7Q8WTQ7 553 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 IGFBPL1Q8WX77 278 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 PTP4A1Q93096 173 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 EXOC4Q96A65 974 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 C8orf76Q96K31 380 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 GBP5Q96PP8 586 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 CITED2Q99967 270 aaPredicted RBP4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 PIMREGQ9BSJ6 248 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 ACAT2Q9BWD1 397 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 TEX12Q9BXU0 123 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 NACAP1Q9BZK3 213 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 KRT23Q9C075 422 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 FTOQ9C0B1 505 aaKnown RBP eCLIP4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 NDST4Q9H3R1 872 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 SMARCAD1Q9H4L7 1026 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 COPS7BQ9H9Q2 264 aaPredicted RBP4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 INTS10Q9NVR2 710 aaKnown RBP4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 UBA2Q9UBT2 640 aaPredicted RBP4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 AGO2Q9UKV8 859 aaKnown RBP4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 PCDHA12Q9UN75 941 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 CNTN6Q9UQ52 1028 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 LAMP3Q9UQV4 416 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 GDAQ9Y2T3 454 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 RRP15Q9Y3B9 282 aaKnown RBP4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 COL16A1Q07092 1604 aaPredicted RBP4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 PDS5AQ29RF7 1337 aaKnown RBP4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 COL24A1Q17RW2 1714 aa4.41□□□□□ -1.7
CALCOCO2-208ENST00000506971 FAM237AA0A1B0GTK4 181 aa4.4□□□□□ -1.71
CALCOCO2-208ENST00000506971 GOLGA6L9A6NEM1 432 aa4.4□□□□□ -1.71
CALCOCO2-208ENST00000506971 SEPT4O43236 478 aa4.4□□□□□ -1.71
CALCOCO2-208ENST00000506971 EPN2O95208 641 aa4.4□□□□□ -1.71
CALCOCO2-208ENST00000506971 TOMM40O96008 361 aa4.4□□□□□ -1.71
CALCOCO2-208ENST00000506971 EEF2P13639 858 aaKnown RBP4.4□□□□□ -1.71
CALCOCO2-208ENST00000506971 CPA1P15085 419 aa4.4□□□□□ -1.71
CALCOCO2-208ENST00000506971 TNFRSF1BP20333 461 aa4.4□□□□□ -1.71
CALCOCO2-208ENST00000506971 NFKBIAP25963 317 aa4.4□□□□□ -1.71
CALCOCO2-208ENST00000506971 HMGB2P26583 209 aaKnown RBP4.4□□□□□ -1.71
CALCOCO2-208ENST00000506971 GCH1P30793 250 aa4.4□□□□□ -1.71
CALCOCO2-208ENST00000506971 TCF7P36402 384 aaPredicted RBP4.4□□□□□ -1.71
CALCOCO2-208ENST00000506971 GPD2P43304 727 aa4.4□□□□□ -1.71
CALCOCO2-208ENST00000506971 LMAN1P49257 510 aa4.4□□□□□ -1.71
CALCOCO2-208ENST00000506971 ZNF75DP51815 510 aa4.4□□□□□ -1.71
CALCOCO2-208ENST00000506971 LIMK1P53667 647 aa4.4□□□□□ -1.71
CALCOCO2-208ENST00000506971 HDAC4P56524 1084 aa4.4□□□□□ -1.71
CALCOCO2-208ENST00000506971 SLC37A1P57057 533 aa4.4□□□□□ -1.71
CALCOCO2-208ENST00000506971 IL1RL1Q01638 556 aa4.4□□□□□ -1.71
CALCOCO2-208ENST00000506971 YWHAHQ04917 246 aaPredicted RBP4.4□□□□□ -1.71
CALCOCO2-208ENST00000506971 SRSF1Q07955 248 aaKnown RBP eCLIP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms