RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 STK39Q9UEW8 545 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 FBXL2Q9UKC9 423 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 VDAC3Q9Y277 283 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 CMAHPQ9Y471 501 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 A0A1W2PQ09 198 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 hCG_1807616A0A1W2PRN6 198 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 KANSL1LA0AUZ9 987 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 PLSCR5A0PG75 271 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 EIF4E1BA6NMX2 242 aaKnown RBP3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 FAM90A26D6RGX4 464 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 ACOT8O14734 319 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 HS3ST1O14792 307 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 CLGNO14967 610 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 ANKRD28O15084 1053 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 OGG1O15527 345 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 KCNN4O15554 427 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 PLPP2O43688 288 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 CAMTA2O94983 1202 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 MYOD1P15172 320 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 UGT1A1P22309 533 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 GCH1P30793 250 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 HOXA13P31271 388 aaPredicted RBP3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 MSH2P43246 934 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 FASLGP48023 281 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 CLDN20P56880 219 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 ISL1P61371 349 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 SREBF2Q12772 1141 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 LRMPQ12912 555 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 COASYQ13057 564 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 ZBTB17Q13105 803 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 AIMP2Q13155 320 aaKnown RBP3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 PDE1CQ14123 709 aaPredicted RBP3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 WTAPQ15007 396 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 CCDC96Q2M329 555 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 RAB41Q5JT25 222 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 CAPRIN2Q6IMN6 1127 aaKnown RBP3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 LCN10Q6JVE6 187 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 GFRALQ6UXV0 394 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 GPR180Q86V85 440 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 RPAP2Q8IXW5 612 aaPredicted RBP3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 HACE1Q8IYU2 909 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 RNF113BQ8IZP6 322 aaKnown RBP3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 C1orf87Q8N0U7 546 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 RASGEF1CQ8N431 466 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 NSUN4Q96CB9 384 aaKnown RBP3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 SAT2Q96F10 170 aaPredicted RBP3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 IGSF21Q96ID5 467 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 QRFPRQ96P65 431 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 DUX5Q96PT3 197 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 SIL1Q9H173 461 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 UBTD1Q9HAC8 227 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 PAG1Q9NWQ8 432 aa3.97□□□□□ -1.77
TOPBP1-204ENST00000505804 PTPRCP08575 1304 aa3.96□□□□□ -1.77
TOPBP1-204ENST00000505804 CSH1P0DML2 217 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 CSH2P0DML3 217 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 ACTN1P12814 892 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 PORP16435 677 aaPredicted RBP3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 PON1P27169 355 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 ACSL1P33121 698 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 GPR143P51810 404 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 RELQ04864 619 aaPredicted RBP3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 PRKG2Q13237 762 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 CUL4AQ13619 759 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 RUSC1-AS1Q66K80 236 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 PAPD4Q6PIY7 484 aaKnown RBP3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 SPSB3Q6PJ21 355 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 CCDC190Q86UF4 302 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 SFR1Q86XK3 245 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 TMEM219Q86XT9 240 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 MAP7D3Q8IWC1 876 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 TMTC2Q8N394 836 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 RBMXL3Q8N7X1 1067 aaKnown RBP3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 TRPC4APQ8TEL6 797 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 SLC44A1Q8WWI5 657 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 PIGTQ969N2 578 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 CDCA5Q96FF9 252 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 NUDCD1Q96RS6 583 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 SEMA3CQ99985 751 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 MAK16Q9BXY0 300 aaKnown RBP3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 TMEM39BQ9GZU3 492 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 CSTL1Q9H114 145 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 SUCLA2Q9P2R7 463 aaPredicted RBP3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 FBXO2Q9UK22 296 aaPredicted RBP3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 ZNF580Q9UK33 172 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 PCDHGB4Q9UN71 923 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 AMDHD2Q9Y303 409 aa3.96□□□□□ -1.78
TOPBP1-204ENST00000505804 CGNL1Q0VF96 1302 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 PRAG1Q86YV5 1406 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 IGHV4OR15-8A0A075B7B6 117 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 LILRA5A6NI73 299 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 CDRT15L2A8MXV6 281 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 B4DLN1 442 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 PRAC2D3DTV9 90 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 TULP2O00295 520 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 SMAD9O15198 467 aaKnown RBP3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 TSPAN9O75954 239 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 TUBBP07437 444 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 TGFB3P10600 412 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 HLA-DOBP13765 273 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 ITGA2P17301 1181 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms