RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 CNOT6Q9ULM6 557 aaKnown RBP11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 PRKAB1Q9Y478 270 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 PCDHGA3Q9Y5H0 932 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 OAS3Q9Y6K5 1087 aaKnown RBP11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 COL6A6A6NMZ7 2263 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 KIR2DS5A0A0G2JLQ3 304 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 A0A0G2JNG1 304 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 OR5K4A6NMS3 321 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 FADS2P1A8MWK0 482 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 KIR2DS3K7RE56 304 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 GRID2O43424 1007 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 SNX2O60749 519 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 KRT1P04264 644 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 ACP5P13686 325 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 MPSTP25325 297 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 CSF2RBP32927 897 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 SLC1A1P43005 524 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 RAB15P59190 212 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 ZBTB17Q13105 803 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 SRSF6Q13247 344 aaKnown RBP11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 NFATC2Q13469 925 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 GALNT3Q14435 633 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 KIR2DS5Q14953 304 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 SKOR2Q2VWA4 1001 aaPredicted RBP11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 ZNF569Q5MCW4 686 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 DCAF12Q5T6F0 453 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 LRRC38Q5VT99 294 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 SLC9A4Q6AI14 798 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 IYDQ6PHW0 289 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 WDR74Q6RFH5 385 aaPredicted RBP11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 BZW1Q7L1Q6 419 aaKnown RBP11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 KDELC2Q7Z4H8 507 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 ZNF761Q86XN6 746 aaPredicted RBP11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 FAM129CQ86XR2 697 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 RFX6Q8HWS3 928 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 PHYKPLQ8IUZ5 450 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 CNTD1Q8N815 330 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 ART4Q93070 314 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 IMP4Q96G21 291 aaKnown RBP11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 AGAP3Q96P47 875 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 WDR24Q96S15 920 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 SRPK1Q96SB4 655 aaKnown RBP11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 ZSCAN5AQ9BUG6 496 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 CARD9Q9H257 536 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 NHEJ1Q9H9Q4 299 aaPredicted RBP11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 MAGEE1Q9HCI5 957 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 ABHD10Q9NUJ1 306 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 DDX56Q9NY93 547 aaKnown RBP11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 TBC1D29Q9UFV1 150 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 KCNK6Q9Y257 313 aa11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 SMG1Q96Q15 3661 aaKnown RBP11.64□□□□□ -0.55
NUDCD3-211ENST00000497978 C3orf70A6NLC5 250 aaPredicted RBP11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 EFCAB7A8K855 629 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 B4E171 279 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 GPR89AB7ZAQ6 455 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 NUAK1O60285 661 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 MTA2O94776 668 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 SLC25A14O95258 325 aaPredicted RBP11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 EML2O95834 649 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 SLC4A1P02730 911 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 GPR89BP0CG08 455 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 SFTPCP11686 197 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 F3P13726 295 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 TSPAN7P41732 249 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 EPHA4P54764 986 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 DCDC1P59894 354 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 CDK18Q07002 472 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 SLC14A2Q15849 920 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 PCSK7Q16549 785 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 SNAP47Q5SQN1 464 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 ALS2CLQ60I27 953 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 PDPK2PQ6A1A2 396 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 RHOT1Q8IXI2 618 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 IL22RA1Q8N6P7 574 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 JPH3Q8WXH2 748 aaPredicted RBP11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 NCSTNQ92542 709 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 EXTL1Q92935 676 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 TEFMQ96QE5 360 aaKnown RBP11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 KCNK17Q96T54 332 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 CEP41Q9BYV8 373 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 GPR63Q9BZJ6 419 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 FAM117AQ9C073 453 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 SLC25A51Q9H1U9 297 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 OR2AG1Q9H205 316 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 EPB41L1Q9H4G0 881 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 TRIM39Q9HCM9 518 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 SPTLC3Q9NUV7 552 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 TMEM9Q9P0T7 183 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 ATXN10Q9UBB4 475 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 SHOC2Q9UQ13 582 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 HEMK1Q9Y5R4 338 aaPredicted RBP11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 MGAQ8IWI9 3026 aa11.63□□□□□ -0.55
NUDCD3-211ENST00000497978 A0A0A6YYK5 440 aaPredicted RBP11.62□□□□□ -0.55
NUDCD3-211ENST00000497978 A8MU76 341 aa11.62□□□□□ -0.55
NUDCD3-211ENST00000497978 SPOPO43791 374 aa11.62□□□□□ -0.55
NUDCD3-211ENST00000497978 MFAP3LO75121 409 aa11.62□□□□□ -0.55
NUDCD3-211ENST00000497978 PIRTP0C851 137 aa11.62□□□□□ -0.55
NUDCD3-211ENST00000497978 TNNT1P13805 278 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms