RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 FSD1LQ9BXM9 530 aa32.89■■■□□ 2.86
CBX4-203ENST00000494546 STRADBQ9C0K7 418 aa32.89■■■□□ 2.86
CBX4-203ENST00000494546 ASCL3Q9NQ33 180 aa32.89■■■□□ 2.86
CBX4-203ENST00000494546 THSD1Q9NS62 852 aa32.89■■■□□ 2.86
CBX4-203ENST00000494546 PCDHGA8Q9Y5G5 932 aa32.89■■■□□ 2.86
CBX4-203ENST00000494546 TMX2-CTNND1H3BSU7 103 aa32.88■■■□□ 2.85
CBX4-203ENST00000494546 ACP5P13686 325 aa32.88■■■□□ 2.85
CBX4-203ENST00000494546 PCBP4P57723 403 aaKnown RBP32.88■■■□□ 2.85
CBX4-203ENST00000494546 ERVPABLB-1P60509 514 aa32.88■■■□□ 2.85
CBX4-203ENST00000494546 SLC1A5Q15758 541 aa32.88■■■□□ 2.85
CBX4-203ENST00000494546 AMZ1Q400G9 498 aa32.88■■■□□ 2.85
CBX4-203ENST00000494546 ITPRIPL1Q6GPH6 555 aa32.88■■■□□ 2.85
CBX4-203ENST00000494546 LIN37Q96GY3 246 aaPredicted RBP32.88■■■□□ 2.85
CBX4-203ENST00000494546 NAF1Q96HR8 494 aaKnown RBP32.88■■■□□ 2.85
CBX4-203ENST00000494546 OR2AG1Q9H205 316 aa32.88■■■□□ 2.85
CBX4-203ENST00000494546 CARD9Q9H257 536 aa32.88■■■□□ 2.85
CBX4-203ENST00000494546 TRABDQ9H4I3 376 aa32.88■■■□□ 2.85
CBX4-203ENST00000494546 KCNK6Q9Y257 313 aa32.88■■■□□ 2.85
CBX4-203ENST00000494546 DSPP15924 2871 aaKnown RBP32.88■■■□□ 2.85
CBX4-203ENST00000494546 TRBV23OR9-2A0A075B6M9 112 aa32.87■■■□□ 2.85
CBX4-203ENST00000494546 KCNN4O15554 427 aa32.87■■■□□ 2.85
CBX4-203ENST00000494546 GRID2O43424 1007 aa32.87■■■□□ 2.85
CBX4-203ENST00000494546 B4GAT1O43505 415 aa32.87■■■□□ 2.85
CBX4-203ENST00000494546 NUAK1O60285 661 aa32.87■■■□□ 2.85
CBX4-203ENST00000494546 HLA-DPA1P20036 260 aa32.87■■■□□ 2.85
CBX4-203ENST00000494546 PDPK2PQ6A1A2 396 aa32.87■■■□□ 2.85
CBX4-203ENST00000494546 ZNF438Q7Z4V0 828 aa32.87■■■□□ 2.85
CBX4-203ENST00000494546 BLOC1S5Q8TDH9 187 aa32.87■■■□□ 2.85
CBX4-203ENST00000494546 GLYATL1Q969I3 302 aa32.87■■■□□ 2.85
CBX4-203ENST00000494546 PRR11Q96HE9 360 aaPredicted RBP32.87■■■□□ 2.85
CBX4-203ENST00000494546 SLC46A1Q96NT5 459 aa32.87■■■□□ 2.85
CBX4-203ENST00000494546 TRIM39Q9HCM9 518 aa32.87■■■□□ 2.85
CBX4-203ENST00000494546 MIF4GDA9UHW6 222 aaKnown RBP32.86■■■□□ 2.85
CBX4-203ENST00000494546 STK10O94804 968 aaKnown RBP32.86■■■□□ 2.85
CBX4-203ENST00000494546 ZNF8P17098 575 aaPredicted RBP32.86■■■□□ 2.85
CBX4-203ENST00000494546 HMGCLP35914 325 aa32.86■■■□□ 2.85
CBX4-203ENST00000494546 GEMP55040 296 aa32.86■■■□□ 2.85
CBX4-203ENST00000494546 MAP9Q49MG5 647 aa32.86■■■□□ 2.85
CBX4-203ENST00000494546 IGF2-ASQ6U949 168 aa32.86■■■□□ 2.85
CBX4-203ENST00000494546 PHYKPLQ8IUZ5 450 aa32.86■■■□□ 2.85
CBX4-203ENST00000494546 TTC30BQ8N4P2 665 aa32.86■■■□□ 2.85
CBX4-203ENST00000494546 ZNF248Q8NDW4 579 aa32.86■■■□□ 2.85
CBX4-203ENST00000494546 CRELD1Q96HD1 420 aa32.86■■■□□ 2.85
CBX4-203ENST00000494546 FICDQ9BVA6 458 aa32.86■■■□□ 2.85
CBX4-203ENST00000494546 HACD3Q9P035 362 aa32.86■■■□□ 2.85
CBX4-203ENST00000494546 CHD6Q8TD26 2715 aa32.85■■■□□ 2.85
CBX4-203ENST00000494546 PPM1DO15297 605 aa32.85■■■□□ 2.85
CBX4-203ENST00000494546 ZW10O43264 779 aa32.85■■■□□ 2.85
CBX4-203ENST00000494546 ANXA9O76027 345 aa32.85■■■□□ 2.85
CBX4-203ENST00000494546 TNFSF15O95150 251 aa32.85■■■□□ 2.85
CBX4-203ENST00000494546 EML2O95834 649 aa32.85■■■□□ 2.85
CBX4-203ENST00000494546 CCKBRP32239 447 aa32.85■■■□□ 2.85
CBX4-203ENST00000494546 ANKRD20A2Q5SQ80 823 aa32.85■■■□□ 2.85
CBX4-203ENST00000494546 ANKRD20A1Q5TYW2 823 aa32.85■■■□□ 2.85
CBX4-203ENST00000494546 ANKRD20A3Q5VUR7 823 aa32.85■■■□□ 2.85
CBX4-203ENST00000494546 RAB11FIP2Q7L804 512 aa32.85■■■□□ 2.85
CBX4-203ENST00000494546 GLT6D1Q7Z4J2 308 aa32.85■■■□□ 2.85
CBX4-203ENST00000494546 PDZD3Q86UT5 571 aa32.85■■■□□ 2.85
CBX4-203ENST00000494546 FBXO39Q8N4B4 442 aa32.85■■■□□ 2.85
CBX4-203ENST00000494546 PLEKHG4BQ96PX9 1271 aa32.85■■■□□ 2.85
CBX4-203ENST00000494546 GORASP1Q9BQQ3 440 aa32.85■■■□□ 2.85
CBX4-203ENST00000494546 RDH14Q9HBH5 336 aa32.85■■■□□ 2.85
CBX4-203ENST00000494546 AGRPO00253 132 aa32.84■■■□□ 2.85
CBX4-203ENST00000494546 PLD2O14939 933 aa32.84■■■□□ 2.85
CBX4-203ENST00000494546 AGTP01019 485 aa32.84■■■□□ 2.85
CBX4-203ENST00000494546 PSMB4P28070 264 aa32.84■■■□□ 2.85
CBX4-203ENST00000494546 EIF3IQ13347 325 aaKnown RBP32.84■■■□□ 2.85
CBX4-203ENST00000494546 NR1D2Q14995 579 aa32.84■■■□□ 2.85
CBX4-203ENST00000494546 CRTC3Q6UUV7 619 aa32.84■■■□□ 2.85
CBX4-203ENST00000494546 USP53Q70EK8 1073 aa32.84■■■□□ 2.85
CBX4-203ENST00000494546 TMPRSS9Q7Z410 1059 aa32.84■■■□□ 2.85
CBX4-203ENST00000494546 ADGRG6Q86SQ4 1221 aa32.84■■■□□ 2.85
CBX4-203ENST00000494546 SLC37A2Q8TED4 501 aa32.84■■■□□ 2.85
CBX4-203ENST00000494546 TBC1D29Q9UFV1 150 aa32.84■■■□□ 2.85
CBX4-203ENST00000494546 CAPN6Q9Y6Q1 641 aa32.84■■■□□ 2.85
CBX4-203ENST00000494546 LAMA5O15230 3695 aa32.83■■■□□ 2.85
CBX4-203ENST00000494546 GOLGA6L9A6NEM1 432 aa32.83■■■□□ 2.85
CBX4-203ENST00000494546 DDX3YO15523 660 aaKnown RBP32.83■■■□□ 2.85
CBX4-203ENST00000494546 SNX2O60749 519 aa32.83■■■□□ 2.85
CBX4-203ENST00000494546 MTX2O75431 263 aa32.83■■■□□ 2.85
CBX4-203ENST00000494546 GPR3P46089 330 aa32.83■■■□□ 2.85
CBX4-203ENST00000494546 ZFP36L1Q07352 338 aaKnown RBP32.83■■■□□ 2.85
CBX4-203ENST00000494546 PRPSAP1Q14558 356 aa32.83■■■□□ 2.85
CBX4-203ENST00000494546 PIM3Q86V86 326 aa32.83■■■□□ 2.85
CBX4-203ENST00000494546 CCDC110Q8TBZ0 833 aa32.83■■■□□ 2.85
CBX4-203ENST00000494546 KIF26BQ2KJY2 2108 aa32.83■■■□□ 2.85
CBX4-203ENST00000494546 BUD23O43709 281 aaKnown RBP32.82■■■□□ 2.84
CBX4-203ENST00000494546 CPNE6O95741 557 aa32.82■■■□□ 2.84
CBX4-203ENST00000494546 HGFP14210 728 aa32.82■■■□□ 2.84
CBX4-203ENST00000494546 GSDMDP57764 484 aa32.82■■■□□ 2.84
CBX4-203ENST00000494546 ATP13A5Q4VNC0 1218 aa32.82■■■□□ 2.84
CBX4-203ENST00000494546 PHF19Q5T6S3 580 aa32.82■■■□□ 2.84
CBX4-203ENST00000494546 SPACA3Q8IXA5 215 aa32.82■■■□□ 2.84
CBX4-203ENST00000494546 SFRP1Q8N474 314 aa32.82■■■□□ 2.84
CBX4-203ENST00000494546 SPATA13Q96N96 652 aa32.82■■■□□ 2.84
CBX4-203ENST00000494546 IL17CQ9P0M4 197 aa32.82■■■□□ 2.84
CBX4-203ENST00000494546 PKP3Q9Y446 797 aa32.82■■■□□ 2.84
CBX4-203ENST00000494546 ADGRG1Q9Y653 693 aa32.82■■■□□ 2.84
CBX4-203ENST00000494546 UNC13CQ8NB66 2214 aa32.81■■■□□ 2.84
CBX4-203ENST00000494546 GPR89AB7ZAQ6 455 aa32.81■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms