RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 AKTIPQ9H8T0 292 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 CYP4F12Q9HCS2 524 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 PALMDQ9NP74 551 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 MID1IP1Q9NPA3 183 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 DDX18Q9NVP1 670 aaKnown RBP11.42□□□□□ -0.58
RFC4-214ENST00000494047 TBCCD1Q9NVR7 557 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 NUDT4Q9NZJ9 180 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 PKD2L2Q9NZM6 624 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 APPL1Q9UKG1 709 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 BLOC1S6Q9UL45 172 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 PADI3Q9ULW8 664 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 PCDHB1Q9Y5F3 818 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 DNAJC15Q9Y5T4 150 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 FAM234BA2RU67 622 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 TMEM233B4DJY2 109 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 H3BMM5 538 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 H7C0S8 307 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 H7C4K7 107 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 NR5A2O00482 541 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 DEAF1O75398 565 aaPredicted RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 NDUFS3O75489 264 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 CDK14O94921 469 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 ARHGEF15O94989 841 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 MOCS2O96007 188 aaPredicted RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 CHRNA1P02708 482 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 CXCL10P02778 98 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 CYBBP04839 570 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 MMP2P08253 660 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 ACRP10323 421 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 TCN1P20061 433 aaPredicted RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 CLCQ05315 142 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 PRKG2Q13237 762 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 RAB30Q15771 203 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 SMAD1Q15797 465 aaKnown RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 ATP6AP1Q15904 470 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 ZBED5Q49AG3 693 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 NHSL2Q5HYW2 709 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 TTC33Q6PID6 262 aaPredicted RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 CERS6Q6ZMG9 384 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 CHST9Q7L1S5 443 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 LPCAT2Q7L5N7 544 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 SPRED1Q7Z699 444 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 PATL1Q86TB9 770 aaKnown RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 ADAMTSL2Q86TH1 951 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 RNF135Q8IUD6 432 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 SCN4BQ8IWT1 228 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 DDIASQ8IXT1 998 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 DEFB123Q8N688 67 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 GLB1L3Q8NCI6 653 aaPredicted RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 PDPRQ8NCN5 879 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 OR52E4Q8NGH9 312 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 SCAMP5Q8TAC9 235 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 PHOSPHO2Q8TCD6 241 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 LRTOMTQ8WZ04 291 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 KCNJ9Q92806 393 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 SDCCAG3Q96C92 435 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 LRRC58Q96CX6 371 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 NMD3Q96D46 503 aaKnown RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 SGF29Q96ES7 293 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 PDLIM5Q96HC4 596 aaKnown RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 PSKH2Q96QS6 385 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 ZNF382Q96SR6 550 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 ADI1Q9BV57 179 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 LRRC3Q9BY71 257 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 ALG2Q9H553 416 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 NOL6Q9H6R4 1146 aaKnown RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 AIG1Q9NVV5 245 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 MIOSQ9NXC5 875 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 SFMBT1Q9UHJ3 866 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 ANAPC2Q9UJX6 822 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 SNX10Q9Y5X0 201 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 OAS3Q9Y6K5 1087 aaKnown RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 SCN5AQ14524 2016 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 CHD5Q8TDI0 1954 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 MYO9BQ13459 2157 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 RNF103-CHMP3A0A140T963 221 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 CCDC154A6NI56 674 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 C16orf96A6NNT2 1141 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 SUPT3HB4E1H0 165 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 PIP5K1BO14986 540 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 MSI1O43347 362 aaKnown RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 SUPT3HO75486 399 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 CLDN11O75508 207 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 RHOBTB1O94844 696 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 UPP2O95045 317 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 GOT2P00505 430 aaKnown RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 LDLRP01130 860 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 ESR1P03372 595 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 S100BP04271 92 aaPredicted RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 HGFP14210 728 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 ATP6V1B1P15313 513 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 OR1E1P30953 314 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 CHRNA4P43681 627 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 BRCC3P46736 316 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 PIK3CGP48736 1102 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 SLC11A2P49281 568 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 CCT8P50990 548 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 CDH4P55283 916 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 DSC1Q08554 894 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 SLC10A7Q0GE19 358 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms