RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 GPR150Q8NGU9 434 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 UBLCP1Q8WVY7 318 aaPredicted RBP14.8□□□□□ -0.04
ACTB-213ENST00000493945 ZNF778Q96MU6 729 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 WDR92Q96MX6 357 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 KLF6Q99612 283 aaPredicted RBP14.8□□□□□ -0.04
ACTB-213ENST00000493945 APOOQ9BUR5 198 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 TEX101Q9BY14 249 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 CLPBQ9H078 707 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 FZD3Q9NPG1 666 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 ZDHHC3Q9NYG2 299 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 NINJ2Q9NZG7 142 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 VPS18Q9P253 973 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 SLC2A6Q9UGQ3 507 aa14.8□□□□□ -0.04
ACTB-213ENST00000493945 CORO1CQ9ULV4 474 aaPredicted RBP14.8□□□□□ -0.04
ACTB-213ENST00000493945 SMG5Q9UPR3 1016 aaKnown RBP14.8□□□□□ -0.04
ACTB-213ENST00000493945 A0A0U1RQS6 177 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 C10orf142B7Z368 130 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 EPN2O95208 641 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 GSTM1P09488 218 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 GM2AP17900 193 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 VCLP18206 1134 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 PTGER3P43115 390 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 XIAPP98170 497 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 GSTM4Q03013 218 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 SRSF5Q13243 272 aaKnown RBP14.79□□□□□ -0.04
ACTB-213ENST00000493945 ATP13A5Q4VNC0 1218 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 IL27RAQ6UWB1 636 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 GCNT7Q6ZNI0 430 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 GALNT7Q86SF2 657 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 PARGQ86W56 976 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 CTAGE3PQ8IX95 158 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 PIGKQ92643 395 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 SLC6A18Q96N87 628 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 DOCK9Q9BZ29 2069 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 ZDHHC5Q9C0B5 715 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 LRRC4CQ9HCJ2 640 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 TM9SF3Q9HD45 589 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 GNPTGQ9UJJ9 305 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 TNRC6BQ9UPQ9 1833 aaKnown RBP14.79□□□□□ -0.04
ACTB-213ENST00000493945 PCDHB1Q9Y5F3 818 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 COMMD10Q9Y6G5 202 aa14.79□□□□□ -0.04
ACTB-213ENST00000493945 TRBV5-4A0A0C4DH59 114 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 TCRBV9S1A1TA0A576 114 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 AGAP14A8MT82 685 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 TNFRSF10CO14798 259 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 VILLO15195 856 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 INPP4BO15327 924 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 YKT6O15498 198 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 DFNA5O60443 496 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 FOXD2O60548 495 aaPredicted RBP14.78□□□□□ -0.04
ACTB-213ENST00000493945 AP2A2O94973 939 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 SYPP08247 313 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 OR56A5P0C7T3 313 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 ITPKAP23677 461 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 SSTR1P30872 391 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 ARCN1P48444 511 aaKnown RBP14.78□□□□□ -0.04
ACTB-213ENST00000493945 ARSDP51689 593 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 PFN3P60673 137 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 PDE1CQ14123 709 aaPredicted RBP14.78□□□□□ -0.04
ACTB-213ENST00000493945 PTPRCAPQ14761 206 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 KYNUQ16719 465 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 TYSND1Q2T9J0 566 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 HSP90AA5PQ58FG0 334 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 GPRC6AQ5T6X5 926 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 PACS1Q6VY07 963 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 Q6ZSR6 202 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 CROCCP2Q86T23 111 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 SERPINA9Q86WD7 417 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 CILP2Q8IUL8 1156 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 CNTN4Q8IWV2 1026 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 AGGF1Q8N302 714 aaeCLIP14.78□□□□□ -0.04
ACTB-213ENST00000493945 AENQ8WTP8 325 aaKnown RBP14.78□□□□□ -0.04
ACTB-213ENST00000493945 PANX3Q96QZ0 392 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 CPNE1Q99829 537 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 NUSAP1Q9BXS6 441 aaKnown RBP14.78□□□□□ -0.04
ACTB-213ENST00000493945 ACSS3Q9H6R3 686 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 SUDS3Q9H7L9 328 aaPredicted RBP14.78□□□□□ -0.04
ACTB-213ENST00000493945 TRIM39Q9HCM9 518 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 MBNL1Q9NR56 388 aaKnown RBP14.78□□□□□ -0.04
ACTB-213ENST00000493945 IARS2Q9NSE4 1012 aaKnown RBP14.78□□□□□ -0.04
ACTB-213ENST00000493945 KLQ9UEF7 1012 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 PILRBQ9UKJ0 227 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 R4GN57 208 aa14.78□□□□□ -0.04
ACTB-213ENST00000493945 EXOC1LA0A1B0GW35 172 aa14.77□□□□□ -0.05
ACTB-213ENST00000493945 UBA6A0AVT1 1052 aaPredicted RBP14.77□□□□□ -0.05
ACTB-213ENST00000493945 FADS2P1A8MWK0 482 aa14.77□□□□□ -0.05
ACTB-213ENST00000493945 TLR4O00206 839 aa14.77□□□□□ -0.05
ACTB-213ENST00000493945 CCL22O00626 93 aa14.77□□□□□ -0.05
ACTB-213ENST00000493945 PRMT5O14744 637 aaPredicted RBP14.77□□□□□ -0.05
ACTB-213ENST00000493945 RAD51BO15315 384 aa14.77□□□□□ -0.05
ACTB-213ENST00000493945 RIPK2O43353 540 aa14.77□□□□□ -0.05
ACTB-213ENST00000493945 CDK14O94921 469 aa14.77□□□□□ -0.05
ACTB-213ENST00000493945 FTH1P02794 183 aa14.77□□□□□ -0.05
ACTB-213ENST00000493945 CFIP05156 583 aa14.77□□□□□ -0.05
ACTB-213ENST00000493945 INHBAP08476 426 aa14.77□□□□□ -0.05
ACTB-213ENST00000493945 ERVK-10P10266 1014 aa14.77□□□□□ -0.05
ACTB-213ENST00000493945 ARRB1P49407 418 aaPredicted RBP14.77□□□□□ -0.05
ACTB-213ENST00000493945 CSE1LP55060 971 aaKnown RBP14.77□□□□□ -0.05
ACTB-213ENST00000493945 CLDN2P57739 230 aa14.77□□□□□ -0.05
ACTB-213ENST00000493945 LGSNQ5TDP6 509 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms