RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 PDCD7Q8N8D1 485 aaKnown RBP10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 MAPK15Q8TD08 544 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 GATA6Q92908 595 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 TMEM121BQ9BXQ6 578 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 ZCCHC2Q9C0B9 1178 aaKnown RBP10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 DPEP2Q9H4A9 486 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 SUDS3Q9H7L9 328 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 SMOXQ9NWM0 555 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 TRMT1Q9NXH9 659 aaKnown RBP10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 TAAR2Q9P1P5 351 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 ATXN10Q9UBB4 475 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 GULP1Q9UBP9 304 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 APPL1Q9UKG1 709 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 CLCA2Q9UQC9 943 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 ARL5AQ9Y689 179 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 ZFC3H1O60293 1989 aaKnown RBP10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 E7EVH7 732 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 PGRMC1O00264 195 aaKnown RBP10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 CHUKO15111 745 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 GRID2O43424 1007 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 NUDT21O43809 227 aaKnown RBP10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 TCEA3O75764 348 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 SUN1O94901 812 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 PRAMEF1O95521 474 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 GAS8O95995 478 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 JUPP14923 745 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 GLB1P16278 677 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 ZNF8P17098 575 aaPredicted RBP10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 AK4P27144 223 aaPredicted RBP10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 ACTR1BP42025 376 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 LMAN1P49257 510 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 ZNF140P52738 457 aaPredicted RBP10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 ACTR1AP61163 376 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 CDH17Q12864 832 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 GTF2H3Q13889 308 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 HLTFQ14527 1009 aaKnown RBP eCLIP10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 PERM1Q5SV97 790 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 LDLRAP1Q5SW96 308 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 CERCAMQ5T4B2 595 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 CDCP2Q5VXM1 449 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 SLC30A9Q6PML9 568 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 FAM151BQ6UXP7 276 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 GSTA5Q7RTV2 222 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 ADGRG6Q86SQ4 1221 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 LRRTM4Q86VH4 590 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 C17orf82Q86X59 251 aaPredicted RBP10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 COL27A1Q8IZC6 1860 aaPredicted RBP10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 DCBLD1Q8N8Z6 715 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 DDHD1Q8NEL9 900 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 OR4K2Q8NGD2 314 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 ZDHHC1Q8WTX9 485 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 DEPDC7Q96QD5 511 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 OSBPL9Q96SU4 736 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 CCDC3Q9BQI4 270 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 ABCG4Q9H172 646 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 OR2AG1Q9H205 316 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 ETNK1Q9HBU6 452 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 EIF2B3Q9NR50 452 aaKnown RBP10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 RAB6BQ9NRW1 208 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 SPATS2LQ9NUQ6 558 aaKnown RBP10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 ZNHIT2Q9UHR6 403 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 ST14Q9Y5Y6 855 aa10.54□□□□□ -0.72
CDC42SE1-206ENST00000492796 ACACBO00763 2458 aa10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 H7C0S8 307 aa10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 GAPDHSO14556 408 aaPredicted RBP10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 KMOO15229 486 aa10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 ZW10O43264 779 aa10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 LDB2O43679 373 aa10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 BUD23O43709 281 aaKnown RBP10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 SRP72O76094 671 aaKnown RBP10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 CDK14O94921 469 aa10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 MT-CO3P00414 261 aa10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 SLC2A4P14672 509 aa10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 CLCNKAP51800 687 aa10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 LAMB3Q13751 1172 aa10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 CHRNA6Q15825 494 aa10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 CHST15Q7LFX5 561 aaPredicted RBP10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 TAB3Q8N5C8 712 aaPredicted RBP10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 PRELID2Q8N945 189 aa10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 DNAAF3Q8N9W5 541 aa10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 GDAP1Q8TB36 358 aa10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 ACTRT1Q8TDG2 376 aa10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 CCDC74AQ96AQ1 378 aa10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 ULK4Q96C45 1275 aa10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 GRAMD1AQ96CP6 724 aa10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 TTC25Q96NG3 672 aa10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 TIMM29Q9BSF4 260 aa10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 TMPRSS11EQ9UL52 423 aa10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 SNX12Q9UMY4 172 aa10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 PCYT1BQ9Y5K3 369 aaPredicted RBP10.53□□□□□ -0.72
CDC42SE1-206ENST00000492796 GOLGA6L10A0A0M3HER8 536 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 FAM149AA5PLN7 773 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 USP27XA6NNY8 438 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 AGAP14A8MT82 685 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 C1QTNF9BB2RNN3 333 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 AP3B1O00203 1094 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 NTN3O00634 580 aaPredicted RBP10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 KCNJ13O60928 360 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 MTX2O75431 263 aa10.52□□□□□ -0.73
CDC42SE1-206ENST00000492796 PROS1P07225 676 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms