RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 SCAND2PQ9GZW5 306 aaPredicted RBP9.07□□□□□ -0.96
SSBP1-212ENST00000489378 ILKAPQ9H0C8 392 aaPredicted RBP9.07□□□□□ -0.96
SSBP1-212ENST00000489378 LATS2Q9NRM7 1088 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 GOLGA6AQ9NYA3 693 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 B4GALT6Q9UBX8 382 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 TBC1D29Q9UFV1 150 aa9.07□□□□□ -0.96
SSBP1-212ENST00000489378 G3BP2Q9UN86 482 aaKnown RBP9.07□□□□□ -0.96
SSBP1-212ENST00000489378 FARSAQ9Y285 508 aaKnown RBP9.07□□□□□ -0.96
SSBP1-212ENST00000489378 ZNF469Q96JG9 3925 aaPredicted RBP9.07□□□□□ -0.96
SSBP1-212ENST00000489378 P4HA2O15460 535 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 COX6B1P14854 86 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 SERPINA4P29622 427 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 ADRA1BP35368 520 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 GLRBP48167 497 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 ATP11AP98196 1134 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 CETN1Q12798 172 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 ART3Q13508 389 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 ANO6Q4KMQ2 910 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 FAM102AQ5T9C2 384 aaPredicted RBP9.06□□□□□ -0.96
SSBP1-212ENST00000489378 LYPD4Q6UWN0 246 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 HSD11B1LQ7Z5J1 315 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 SRLQ86TD4 932 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 KCNMB4Q86W47 210 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 ZDHHC17Q8IUH5 632 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 TBC1D31Q96DN5 1066 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 DTD2Q96FN9 168 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 NSMCE3Q96MG7 304 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 EPB41L1Q9H4G0 881 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 STN1Q9H668 368 aaKnown RBP9.06□□□□□ -0.96
SSBP1-212ENST00000489378 RETREG1Q9H6L5 497 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 ATP13A3Q9H7F0 1226 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 UBA2Q9UBT2 640 aaPredicted RBP9.06□□□□□ -0.96
SSBP1-212ENST00000489378 PRKAB1Q9Y478 270 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 KLF2Q9Y5W3 355 aaPredicted RBP9.06□□□□□ -0.96
SSBP1-212ENST00000489378 SLC30A1Q9Y6M5 507 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 SPTBP11277 2137 aa9.06□□□□□ -0.96
SSBP1-212ENST00000489378 LILRA5A6NI73 299 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 TOX3O15405 576 aaPredicted RBP9.05□□□□□ -0.96
SSBP1-212ENST00000489378 PRICKLE3O43900 615 aaPredicted RBP9.05□□□□□ -0.96
SSBP1-212ENST00000489378 RASSF9O75901 435 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 NADKO95544 446 aaPredicted RBP9.05□□□□□ -0.96
SSBP1-212ENST00000489378 SOD1P00441 154 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 TNFAIP3P21580 790 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 CMA1P23946 247 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 SYKP43405 635 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 NDUFA8P51970 172 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 HDAC4P56524 1084 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 SNX16P57768 344 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 PTPRRQ15256 657 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 KYNUQ16719 465 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 CCDC40Q4G0X9 1142 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 C2CD6Q53TS8 623 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 VWA5B1Q5TIE3 1220 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 RFLNAQ6ZTI6 216 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 Q6ZVL8 140 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 SLC9B2Q86UD5 537 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 CDH24Q86UP0 819 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 CUZD1Q86UP6 607 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 GALNT13Q8IUC8 556 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 PAF1Q8N7H5 531 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 TSEN2Q8NCE0 465 aaKnown RBP9.05□□□□□ -0.96
SSBP1-212ENST00000489378 ITLN2Q8WWU7 325 aaPredicted RBP9.05□□□□□ -0.96
SSBP1-212ENST00000489378 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.05□□□□□ -0.96
SSBP1-212ENST00000489378 PDFQ9HBH1 243 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 AGPAT4Q9NRZ5 378 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 TMEM51Q9NW97 253 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 C5AR2Q9P296 337 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 CPNE7Q9UBL6 633 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 CNOT8Q9UFF9 292 aaKnown RBP9.05□□□□□ -0.96
SSBP1-212ENST00000489378 RCOR1Q9UKL0 485 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 KCNK6Q9Y257 313 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 SEC16AO15027 2179 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 GOLGA8SH3BPF8 625 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 J3KR12 359 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 TRAFD1O14545 582 aaPredicted RBP9.05□□□□□ -0.96
SSBP1-212ENST00000489378 SNX2O60749 519 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 HEXIM1O94992 359 aaKnown RBP9.05□□□□□ -0.96
SSBP1-212ENST00000489378 BPIP17213 487 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 LHCGRP22888 699 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 TEAD1P28347 426 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 CA5AP35218 305 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 CSNK1DP48730 415 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 APBA1Q02410 837 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 BCL2L1Q07817 233 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 ATP1A4Q13733 1029 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 LRP8Q14114 963 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 KCNAB1Q14722 419 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 LLGL1Q15334 1064 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 HGSNATQ68CP4 663 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 LCN10Q6JVE6 187 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 KRBA2Q6ZNG9 492 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 FAM92BQ6ZTR7 304 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 NXPE1Q8N323 547 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 ZBTB2Q8N680 514 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 ARFGAP1Q8N6T3 406 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 CCDC185Q8N715 623 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 EMC1Q8N766 993 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 RTL3Q8N8U3 475 aaKnown RBP9.05□□□□□ -0.96
SSBP1-212ENST00000489378 TMEM102Q8N9M5 508 aaPredicted RBP9.05□□□□□ -0.96
SSBP1-212ENST00000489378 KLHL6Q8WZ60 621 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms