RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 TMEM121Q9BTD3 319 aa14.07□□□□□ -0.16
COL9A2-208ENST00000488463 SPATA16Q9BXB7 569 aa14.07□□□□□ -0.16
COL9A2-208ENST00000488463 KCNF1Q9H3M0 494 aa14.07□□□□□ -0.16
COL9A2-208ENST00000488463 ARFGAP3Q9NP61 516 aa14.07□□□□□ -0.16
COL9A2-208ENST00000488463 RAD18Q9NS91 495 aa14.07□□□□□ -0.16
COL9A2-208ENST00000488463 HACD3Q9P035 362 aa14.07□□□□□ -0.16
COL9A2-208ENST00000488463 APPL1Q9UKG1 709 aa14.07□□□□□ -0.16
COL9A2-208ENST00000488463 AAR2Q9Y312 384 aaKnown RBP14.07□□□□□ -0.16
COL9A2-208ENST00000488463 PRKAB1Q9Y478 270 aa14.07□□□□□ -0.16
COL9A2-208ENST00000488463 RNF215Q9Y6U7 377 aa14.07□□□□□ -0.16
COL9A2-208ENST00000488463 SMG1Q96Q15 3661 aaKnown RBP14.06□□□□□ -0.16
COL9A2-208ENST00000488463 A6NCN8 305 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 B4DGG1 531 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 CHUKO15111 745 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 LIASO43766 372 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 NUAK1O60285 661 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 USP12O75317 370 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 SLC4A1P02730 911 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 GLB1P16278 677 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 ZNF8P17098 575 aaPredicted RBP14.06□□□□□ -0.16
COL9A2-208ENST00000488463 MAZP56270 477 aaKnown RBP14.06□□□□□ -0.16
COL9A2-208ENST00000488463 CYP4F3Q08477 520 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 LRP8Q14114 963 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 NR1D2Q14995 579 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 ISXQ2M1V0 245 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 PARP6Q2NL67 630 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 ZNF569Q5MCW4 686 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 SLC30A9Q6PML9 568 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 GALNT13Q8IUC8 556 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 OR6C4Q8NGE1 309 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 BLOC1S5Q8TDH9 187 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 VPS35Q96QK1 796 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 FERMT1Q9BQL6 677 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 FSD1LQ9BXM9 530 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 NRSN2Q9GZP1 204 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 DPEP2Q9H4A9 486 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 CCDC86Q9H6F5 360 aaKnown RBP14.06□□□□□ -0.16
COL9A2-208ENST00000488463 RMI1Q9H9A7 625 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 TRIM39Q9HCM9 518 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 GPSM3Q9Y4H4 160 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 KCTD3Q9Y597 815 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 ARL5AQ9Y689 179 aa14.06□□□□□ -0.16
COL9A2-208ENST00000488463 SRRM3A6NNA2 597 aaPredicted RBP14.05□□□□□ -0.16
COL9A2-208ENST00000488463 GPR39O43194 453 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 BUD23O43709 281 aaKnown RBP14.05□□□□□ -0.16
COL9A2-208ENST00000488463 NUDT21O43809 227 aaKnown RBP14.05□□□□□ -0.16
COL9A2-208ENST00000488463 NRDCO43847 1150 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 CSO75390 466 aaKnown RBP14.05□□□□□ -0.16
COL9A2-208ENST00000488463 TCEA3O75764 348 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 STK10O94804 968 aaKnown RBP14.05□□□□□ -0.16
COL9A2-208ENST00000488463 SLC25A14O95258 325 aaPredicted RBP14.05□□□□□ -0.16
COL9A2-208ENST00000488463 ASMTLO95671 621 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 ECEL1O95672 775 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 PNLIPP16233 465 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 ACTR1BP42025 376 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 ACTR1AP61163 376 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 CCL7P80098 99 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 B4GALNT1Q00973 533 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 SPARCL1Q14515 664 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 SEL1L2Q5TEA6 688 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 GLT6D1Q7Z4J2 308 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 C11orf96Q7Z7L8 435 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 ZNF547Q8IVP9 402 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 REXO1L1PQ8IX06 675 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 ARL14Q8N4G2 192 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 TRIM58Q8NG06 486 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 ZDHHC1Q8WTX9 485 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 C1orf54Q8WWF1 131 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 FRMD8P1Q9BZ68 369 aaPredicted RBP14.05□□□□□ -0.16
COL9A2-208ENST00000488463 ABCG4Q9H172 646 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 OR2AG1Q9H205 316 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 SLC23A2Q9UGH3 650 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 ZNHIT2Q9UHR6 403 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 ENTPD2Q9Y5L3 495 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 ATRXP46100 2492 aa14.05□□□□□ -0.16
COL9A2-208ENST00000488463 GPR89AB7ZAQ6 455 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 GRID2O43424 1007 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 B4GAT1O43505 415 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 UGT1A9O60656 530 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 PPFIA2O75334 1257 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 MTX2O75431 263 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 PTMAP06454 111 aaKnown RBP14.04□□□□□ -0.16
COL9A2-208ENST00000488463 GPR89BP0CG08 455 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 UGT1A6P19224 532 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 UGT1A1P22309 533 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 UGT1A4P22310 534 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 UGT1A3P35503 534 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 UGT1A5P35504 534 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 SPAM1P38567 509 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 ZNF140P52738 457 aaPredicted RBP14.04□□□□□ -0.16
COL9A2-208ENST00000488463 XIAPP98170 497 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 PRPSAP1Q14558 356 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 TAF1AQ15573 450 aaPredicted RBP14.04□□□□□ -0.16
COL9A2-208ENST00000488463 CHRNA6Q15825 494 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 RBM44Q6ZP01 1051 aaKnown RBP14.04□□□□□ -0.16
COL9A2-208ENST00000488463 ARHGEF18Q6ZSZ5 1173 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 TMPRSS9Q7Z410 1059 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 SPRED1Q7Z699 444 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 PHYKPLQ8IUZ5 450 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 GLIS1Q8NBF1 620 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms