RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 KLQ9UEF7 1012 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 RPS6KL1Q9Y6S9 549 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 ANKHD1Q8IWZ3 2542 aaKnown RBP5.35□□□□□ -1.55
PTPN4-210ENST00000485247 PIPSLA2A3N6 862 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 A8MU76 341 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 FFAR3O14843 346 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 LRRTM2O43300 516 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 TSPAN6O43657 245 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 AP1G1O43747 822 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 PPP6R2O75170 966 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 LRCH4O75427 683 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 TNFP01375 233 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 APOEP02649 317 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 LTFP02788 710 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 THBDP07204 575 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 THRAP10827 490 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 HTR1BP28222 390 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 CSF2RBP32927 897 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 MAN1A1P33908 653 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 STAT5AP42229 794 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 RGS7P49802 495 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 CCL11P51671 97 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 RAD23BP54727 409 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 ANAPC15P60006 121 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 CDK18Q07002 472 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 CHAF1BQ13112 559 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 VWA3BQ502W6 1294 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 CPZQ66K79 652 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 SPECC1LQ69YQ0 1117 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 CEACAM20Q6UY09 585 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 EPM2AIP1Q7L775 607 aaPredicted RBP5.35□□□□□ -1.55
PTPN4-210ENST00000485247 APLFQ8IW19 511 aaPredicted RBP5.35□□□□□ -1.55
PTPN4-210ENST00000485247 CISD2Q8N5K1 135 aaKnown RBP5.35□□□□□ -1.55
PTPN4-210ENST00000485247 SLC4A11Q8NBS3 891 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 SYT8Q8NBV8 401 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 OR4D9Q8NGE8 314 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 UBA3Q8TBC4 463 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 DQX1Q8TE96 717 aaKnown RBP5.35□□□□□ -1.55
PTPN4-210ENST00000485247 CLEC4CQ8WTT0 213 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 ASB12Q8WXK4 309 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 TSPAN17Q96FV3 270 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 SLC39A13Q96H72 371 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 SERPINB11Q96P15 392 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 RBM15Q96T37 977 aaKnown RBP eCLIP5.35□□□□□ -1.55
PTPN4-210ENST00000485247 TWSG1Q9GZX9 223 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 ZSCAN16Q9H4T2 348 aaPredicted RBP5.35□□□□□ -1.55
PTPN4-210ENST00000485247 APMAPQ9HDC9 416 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 CROTQ9UKG9 612 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 TSPAN16Q9UKR8 245 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 LIMCH1Q9UPQ0 1083 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 HS3ST2Q9Y278 367 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 TMEM184BQ9Y519 407 aaPredicted RBP5.35□□□□□ -1.55
PTPN4-210ENST00000485247 OR51B4Q9Y5P0 310 aa5.35□□□□□ -1.55
PTPN4-210ENST00000485247 DNHD1Q96M86 4753 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 ZSCAN5CA6NGD5 496 aaPredicted RBP5.34□□□□□ -1.55
PTPN4-210ENST00000485247 TMEM110-MUSTN1A8MSY1 372 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 ZW10O43264 779 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 DPM1O60762 260 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 TM7SF2O76062 418 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 FYNP06241 537 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 ITGA3P26006 1051 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 GKP32189 559 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 PTGER4P35408 488 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 STAT6P42226 847 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 PPM1FP49593 454 aaPredicted RBP5.34□□□□□ -1.55
PTPN4-210ENST00000485247 PEX5P50542 639 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 DNA2P51530 1060 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 ITGA1P56199 1179 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 PER3P56645 1201 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 KRTAP10-9P60411 292 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 KRT83P78385 493 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 MC2RQ01718 297 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 BST2Q10589 180 aaKnown RBP5.34□□□□□ -1.55
PTPN4-210ENST00000485247 BIRC2Q13490 618 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 NFATC4Q14934 902 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 IRF4Q15306 451 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 CLPPQ16740 277 aaPredicted RBP5.34□□□□□ -1.55
PTPN4-210ENST00000485247 KLHL40Q2TBA0 621 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 LRRC73Q5JTD7 316 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 RABGAP1LQ5R372 815 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 C22orf39Q6P5X5 142 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 FOXR2Q6PJQ5 311 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 CCDC73Q6ZRK6 1079 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 TAC4Q86UU9 113 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 ZSCAN30Q86W11 494 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 ESX1Q8N693 406 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 LINC01356Q8N9X3 169 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 NETO2Q8NC67 525 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 CCL4L1Q8NHW4 92 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 TAS1R2Q8TE23 839 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 ALG3Q92685 438 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 PPP1R14AQ96A00 147 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 PNPLA2Q96AD5 504 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 PDXPQ96GD0 296 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 BTN2A3PQ96KV6 586 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 RPRD1AQ96P16 312 aaPredicted RBP5.34□□□□□ -1.55
PTPN4-210ENST00000485247 HEPHQ9BQS7 1158 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 C1QTNF7Q9BXJ2 289 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 MIS12Q9H081 205 aa5.34□□□□□ -1.55
PTPN4-210ENST00000485247 TMEM168Q9H0V1 697 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms