RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 RTP4Q96DX8 246 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 CCDC126Q96EE4 140 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 CNDP1Q96KN2 507 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 CEP170P1Q96L14 293 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 TAAR1Q96RJ0 339 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 CGRRF1Q99675 332 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 OLFM1Q99784 485 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 CCT7Q99832 543 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 EBNA1BP2Q99848 306 aaKnown RBP4.92□□□□□ -1.62
LRCH3-214ENST00000473177 TUBA1CQ9BQE3 449 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 FAM213AQ9BRX8 229 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 C16orf70Q9BSU1 422 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 TMEM121Q9BTD3 319 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 C1orf50Q9BV19 199 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 MRPL1Q9BYD6 325 aaKnown RBP4.92□□□□□ -1.62
LRCH3-214ENST00000473177 OSBPL6Q9BZF3 934 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 EBF3Q9H4W6 596 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 CLK4Q9HAZ1 481 aaKnown RBP4.92□□□□□ -1.62
LRCH3-214ENST00000473177 CYP3A43Q9HB55 503 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 MRM3Q9HC36 420 aaKnown RBP4.92□□□□□ -1.62
LRCH3-214ENST00000473177 AGO4Q9HCK5 861 aaKnown RBP4.92□□□□□ -1.62
LRCH3-214ENST00000473177 PARD6AQ9NPB6 346 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 KCNH7Q9NS40 1196 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 PNPLA3Q9NST1 481 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 NRBP2Q9NSY0 501 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 TMEM9Q9P0T7 183 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 SLC17A7Q9P2U7 560 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 ZNHIT2Q9UHR6 403 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 FBXO4Q9UKT5 387 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 DSEQ9UL01 958 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 CHMP2BQ9UQN3 213 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 POMPQ9Y244 141 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 NUB1Q9Y5A7 615 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 UBIAD1Q9Y5Z9 338 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 RAD54BQ9Y620 910 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 MYO15AQ9UKN7 3530 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 NLRC5Q86WI3 1866 aa4.92□□□□□ -1.62
LRCH3-214ENST00000473177 MYH11P35749 1972 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 MICAL3Q7RTP6 2002 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 TMEM8BA6NDV4 472 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 FAM159BA6NKW6 160 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 ERI2A8K979 691 aaKnown RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 CBX4O00257 560 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 APOL1O14791 398 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 MTSS1O43312 755 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 TIMM44O43615 452 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 FOXD2O60548 495 aaPredicted RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 RNASEH1O60930 286 aaKnown RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 GCATO75600 419 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 IL18RAPO95256 599 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 HSPA4LO95757 839 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 AMY2AP04746 511 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 POLBP06746 335 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 ALOX5P09917 674 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 RALBP11234 206 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 MYCLP12524 364 aaPredicted RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 COX4I1P13073 169 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 KRT10P13645 584 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 PORP16435 677 aaPredicted RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 AMY2BP19961 511 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 IL10P22301 178 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 UBA1P22314 1058 aaKnown RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 S100A1P23297 94 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 CCND2P30279 289 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 HOXA13P31271 388 aaPredicted RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 HOXC8P31273 242 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 ATICP31939 592 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 GJC1P36383 396 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 NAMPTP43490 491 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 HARS2P49590 506 aaKnown RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 TUBP50607 506 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 MECP2P51608 486 aaKnown RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 BCAR1P56945 870 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 TAS2R40P59535 323 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 NAA20P61599 178 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 PSMC1P62191 440 aaKnown RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 RIPPLY1Q0D2K3 151 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 PRKAA1Q13131 559 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 MTA1Q13330 715 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 KRR1Q13601 381 aaKnown RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 TUBA3CQ13748 450 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 FLOT2Q14254 428 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 UBXN2BQ14CS0 331 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 NOMO1Q15155 1222 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 UGP2Q16851 508 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 ZBED5Q49AG3 693 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 KCTD21Q4G0X4 260 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 AASDHQ4L235 1098 aaPredicted RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 XKR3Q5GH77 459 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 FBXO47Q5MNV8 452 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 PDPK2PQ6A1A2 396 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 LAIR1Q6GTX8 287 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 KLHDC10Q6PID8 442 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 DCLRE1AQ6PJP8 1040 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 ARHGAP36Q6ZRI8 547 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 PRR23BQ6ZRT6 265 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 SH2D5Q6ZV89 423 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 LPCAT2Q7L5N7 544 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 MAEAQ7L5Y9 396 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms