RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 DGKBQ9Y6T7 804 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 PMPCBO75439 489 aa19.62■□□□□ 0.73
SDF4-205ENST00000465727 MT-ND1P03886 318 aa19.62■□□□□ 0.73
SDF4-205ENST00000465727 HTR1AP08908 422 aa19.62■□□□□ 0.73
SDF4-205ENST00000465727 CHRNA4P43681 627 aa19.62■□□□□ 0.73
SDF4-205ENST00000465727 GSSP48637 474 aa19.62■□□□□ 0.73
SDF4-205ENST00000465727 KPNA1P52294 538 aaPredicted RBP19.62■□□□□ 0.73
SDF4-205ENST00000465727 FOXA1P55317 472 aa19.62■□□□□ 0.73
SDF4-205ENST00000465727 MAP3K7CLP57077 242 aa19.62■□□□□ 0.73
SDF4-205ENST00000465727 POLD3Q15054 466 aaPredicted RBP19.62■□□□□ 0.73
SDF4-205ENST00000465727 TIGD7Q6NT04 549 aaPredicted RBP19.62■□□□□ 0.73
SDF4-205ENST00000465727 SLC2A7Q6PXP3 512 aa19.62■□□□□ 0.73
SDF4-205ENST00000465727 OSTM1Q86WC4 334 aa19.62■□□□□ 0.73
SDF4-205ENST00000465727 PTERQ96BW5 349 aa19.62■□□□□ 0.73
SDF4-205ENST00000465727 CTRCQ99895 268 aa19.62■□□□□ 0.73
SDF4-205ENST00000465727 MED10Q9BTT4 135 aa19.62■□□□□ 0.73
SDF4-205ENST00000465727 TRIM8Q9BZR9 551 aa19.62■□□□□ 0.73
SDF4-205ENST00000465727 BRINP2Q9C0B6 783 aa19.62■□□□□ 0.73
SDF4-205ENST00000465727 TOR3AQ9H497 397 aa19.62■□□□□ 0.73
SDF4-205ENST00000465727 ATP13A3Q9H7F0 1226 aa19.62■□□□□ 0.73
SDF4-205ENST00000465727 NECTIN3Q9NQS3 549 aa19.62■□□□□ 0.73
SDF4-205ENST00000465727 POLR3BQ9NW08 1133 aaPredicted RBP19.62■□□□□ 0.73
SDF4-205ENST00000465727 FAM118AQ9NWS6 357 aa19.62■□□□□ 0.73
SDF4-205ENST00000465727 PCDHGA8Q9Y5G5 932 aa19.62■□□□□ 0.73
SDF4-205ENST00000465727 MCM3APO60318 1980 aa19.62■□□□□ 0.73
SDF4-205ENST00000465727 H3BMM5 538 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 MAFKO60675 156 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 RECQL4O94761 1208 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 SLC25A27O95847 323 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 CD1DP15813 335 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 IL7RP16871 459 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 APLP1P51693 650 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 CDKN2DP55273 166 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 TPD52P55327 224 aaPredicted RBP19.61■□□□□ 0.73
SDF4-205ENST00000465727 KCNJ8Q15842 424 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 FUT11Q495W5 492 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 PAGE3Q5JUK9 113 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 GLYATQ6IB77 296 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 NOTUMQ6P988 496 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 ARHGAP36Q6ZRI8 547 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 EFL1Q7Z2Z2 1120 aaKnown RBP19.61■□□□□ 0.73
SDF4-205ENST00000465727 SAMD7Q7Z3H4 446 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 STK32CQ86UX6 486 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 AADATQ8N5Z0 425 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 PJA1Q8NG27 643 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 VPS33AQ96AX1 596 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 ZNF419Q96HQ0 510 aaPredicted RBP19.61■□□□□ 0.73
SDF4-205ENST00000465727 KLHL25Q9H0H3 589 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 ERVK-11Q9UQG0 969 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 PCDHGB1Q9Y5G3 927 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 SNX10Q9Y5X0 201 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 MIA3Q5JRA6 1907 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 SLC22A3O75751 556 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 LINC00032P0C843 101 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 PTPN2P17706 415 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 HTR7P34969 479 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 ZFP36L2P47974 494 aaKnown RBP19.61■□□□□ 0.73
SDF4-205ENST00000465727 LCP2Q13094 533 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 MAPRE1Q15691 268 aaKnown RBP19.61■□□□□ 0.73
SDF4-205ENST00000465727 DGUOKQ16854 277 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 HID1Q8IV36 788 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 ARHGAP12Q8IWW6 846 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 OR7A2PQ8NGA2 310 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 RPL10LQ96L21 214 aaKnown RBP19.61■□□□□ 0.73
SDF4-205ENST00000465727 DGCR6LQ9BY27 220 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 MFSD1Q9H3U5 465 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 POPDC3Q9HBV1 291 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 USE1Q9NZ43 259 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 DNMT3BQ9UBC3 853 aaKnown RBP19.61■□□□□ 0.73
SDF4-205ENST00000465727 SUN2Q9UH99 717 aa19.61■□□□□ 0.73
SDF4-205ENST00000465727 NDUFS2O75306 463 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 PGK2P07205 417 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 DIO3P55073 304 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 CHRNB3Q05901 458 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 RAB41Q5JT25 222 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 CATSPER4Q7RTX7 472 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 PIWIL3Q7Z3Z3 882 aaKnown RBP19.6■□□□□ 0.73
SDF4-205ENST00000465727 MICALL2Q8IY33 904 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 SCML4Q8N228 414 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 SVOPLQ8N434 492 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 MFSD4AQ8N468 514 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 ISG20Q96AZ6 181 aaKnown RBP19.6■□□□□ 0.73
SDF4-205ENST00000465727 NODALQ96S42 347 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 NUSAP1Q9BXS6 441 aaKnown RBP19.6■□□□□ 0.73
SDF4-205ENST00000465727 COMMD8Q9NX08 183 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 ZIM2Q9NZV7 527 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 SMIM28A0A1B0GU29 152 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 ZNF99A8MXY4 864 aaPredicted RBP19.6■□□□□ 0.73
SDF4-205ENST00000465727 G3V2T6 193 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 MSI1O43347 362 aaKnown RBP19.6■□□□□ 0.73
SDF4-205ENST00000465727 C1RP00736 705 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 HLA-DQB2P05538 268 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 TCF3P15923 654 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 PCMT1P22061 227 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 FDXRP22570 491 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 GRK3P35626 688 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 POLR2JP52435 117 aaKnown RBP19.6■□□□□ 0.73
SDF4-205ENST00000465727 ACOX1Q15067 660 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 DPY19L1Q2PZI1 675 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 FAM219BQ5XKK7 198 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms