RNA–Protein interactions for RNA: ENST00000463419.1

NIN-208, Transcript of ninein, humanhuman

TSL 4

Gene NIN, Length 1,317 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-208ENST00000463419 TRBV23OR9-2A0A075B6M9 112 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 RCCD1A6NED2 376 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 SOWAHDA6NJG2 315 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 PMPCBO75439 489 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 CPNE6O95741 557 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 NDST3O95803 873 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 SLC4A1P02730 911 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 JMJD7P0C870 316 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 ITIH1P19827 911 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 NFKB1P19838 968 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 CD1CP29017 333 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 SLC5A2P31639 672 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 GPR3P46089 330 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 TMPRSS3P57727 454 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 BIRC2Q13490 618 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 ZNF648Q5T619 568 aaPredicted RBP12.85□□□□□ -0.35
NIN-208ENST00000463419 PHF19Q5T6S3 580 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 ALS2CLQ60I27 953 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 ZNF574Q6ZN55 896 aaPredicted RBP12.85□□□□□ -0.35
NIN-208ENST00000463419 USP53Q70EK8 1073 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 DAAM2Q86T65 1068 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 PIM3Q86V86 326 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 CCDC50Q8IVM0 306 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 RCOR2Q8IZ40 523 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 P3H4Q92791 437 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 HAUS1Q96CS2 278 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 PANX2Q96RD6 677 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 NUDT22Q9BRQ3 303 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 SPATA16Q9BXB7 569 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 GPR63Q9BZJ6 419 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 ARFGAP3Q9NP61 516 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 PISDQ9UG56 409 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 PCDHGA7Q9Y5G6 932 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 SPO11Q9Y5K1 396 aa12.85□□□□□ -0.35
NIN-208ENST00000463419 URB1O60287 2271 aaKnown RBP12.85□□□□□ -0.35
NIN-208ENST00000463419 ASXL3Q9C0F0 2248 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 ACACAQ13085 2346 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 BPTFQ12830 3046 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 IGHV1OR21-1A0A087WYE8 117 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 AURKAO14965 403 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 NUAK1O60285 661 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 NDUFA10O95299 355 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 ZNF8P17098 575 aaPredicted RBP12.84□□□□□ -0.35
NIN-208ENST00000463419 FECHP22830 423 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 ETV5P41161 510 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 UCNP55089 124 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 DCDC1P59894 354 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 CLN3Q13286 438 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 COL9A2Q14055 689 aaPredicted RBP12.84□□□□□ -0.35
NIN-208ENST00000463419 C16orf72Q14CZ0 275 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 NKAIN2Q5VXU1 208 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 CCDC70Q6NSX1 233 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 KDELC1Q6UW63 502 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 JAMLQ86YT9 394 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 SFRP1Q8N474 314 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 TRAM1L1Q8N609 369 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 SLC37A2Q8TED4 501 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 TMEM159Q96B96 161 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 POM121Q96HA1 1249 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 RBM41Q96IZ5 413 aaKnown RBP12.84□□□□□ -0.35
NIN-208ENST00000463419 CMKLR1Q99788 373 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 ZSCAN5AQ9BUG6 496 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 HEMGNQ9BXL5 484 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 CARD9Q9H257 536 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 RMI1Q9H9A7 625 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 LUC7LQ9NQ29 371 aaKnown RBP12.84□□□□□ -0.35
NIN-208ENST00000463419 ATXN10Q9UBB4 475 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 NFKBIL1Q9UBC1 381 aaPredicted RBP12.84□□□□□ -0.35
NIN-208ENST00000463419 TBC1D29Q9UFV1 150 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 FAM153AQ9UHL3 310 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 KCNK6Q9Y257 313 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.84□□□□□ -0.35
NIN-208ENST00000463419 EPN1Q9Y6I3 576 aaPredicted RBP12.84□□□□□ -0.35
NIN-208ENST00000463419 DUSP10Q9Y6W6 482 aa12.84□□□□□ -0.35
NIN-208ENST00000463419 IGHV5-10-1A0A0J9YXX1 117 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 TEX51A0A1B0GUA7 166 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 LOC285095A0A1B0GVY8 99 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 F5H423 210 aaPredicted RBP12.83□□□□□ -0.36
NIN-208ENST00000463419 ZW10O43264 779 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 MTSS1O43312 755 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 GRID2O43424 1007 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 SLC25A14O95258 325 aaPredicted RBP12.83□□□□□ -0.36
NIN-208ENST00000463419 ACP5P13686 325 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 BPIP17213 487 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 CTNNA1P35221 906 aaKnown RBP12.83□□□□□ -0.36
NIN-208ENST00000463419 FASLGP48023 281 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 WNT3AP56704 352 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 CFHR1Q03591 330 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 NOMO1Q15155 1222 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 PPP2R5EQ16537 467 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 CLPPQ16740 277 aaPredicted RBP12.83□□□□□ -0.36
NIN-208ENST00000463419 ZNF569Q5MCW4 686 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 ARHGAP40Q5TG30 622 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 BLOC1S3Q6QNY0 202 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 RAD9BQ6WBX8 426 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 PID1Q7Z2X4 250 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 ADGRG6Q86SQ4 1221 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 TMTC1Q8IUR5 882 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 ZNF567Q8N184 647 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 RCBTB1Q8NDN9 531 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms