RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 CCR3P51677 355 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 PGGT1BP53609 377 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 CSE1LP55060 971 aaKnown RBP4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 ROR2Q01974 943 aaKnown RBP4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 YWHAHQ04917 246 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 ACSM2AQ08AH3 577 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 COASYQ13057 564 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 HNF4GQ14541 408 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 HYAL4Q2M3T9 481 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 COL28A1Q2UY09 1125 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 LETM2Q2VYF4 491 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 PCGF3Q3KNV8 242 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 CXorf66Q5JRM2 361 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 ACSM2BQ68CK6 577 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 PMS2CLQ68D20 193 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 Q6ZTK2 550 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 CATSPER4Q7RTX7 472 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 TBC1D26Q86UD7 250 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 LMNTD2Q8IXW0 634 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 TEX9Q8N6V9 391 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 CLEC18CQ8NCF0 446 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 NSMCE1Q8WV22 266 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 EXOC4Q96A65 974 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 CABS1Q96KC9 395 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 CCDC114Q96M63 670 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 GAD1Q99259 594 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 SYT17Q9BSW7 474 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 ACAT2Q9BWD1 397 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 FUT8Q9BYC5 575 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 MMADHCQ9H3L0 296 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 CLK4Q9HAZ1 481 aaKnown RBP4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 MBNL1Q9NR56 388 aaKnown RBP4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 DDX43Q9NXZ2 648 aaKnown RBP4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 TMCC3Q9ULS5 477 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 CARD8Q9Y2G2 431 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 AAR2Q9Y312 384 aaKnown RBP4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 A3GALT2U3KPV4 340 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 ERCC6Q03468 1493 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 LRRC72A6NJI9 287 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 NPIPB11E5RHQ5 1161 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 TADA2AO75478 443 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 TFP02787 698 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 CYP1A2P05177 515 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 FAM200BP0CF97 657 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 IL7RP16871 459 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 ERCC2P18074 760 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 HLA-DPA1P20036 260 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 MYF6P23409 242 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 SCN1BQ07699 218 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 C17orf67Q0P5P2 114 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 Q0VFX4 171 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 CAPSQ13938 189 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 TNIP1Q15025 636 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 SHBQ15464 509 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 ZNF260Q3ZCT1 412 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 PARP10Q53GL7 1025 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 ESCO2Q56NI9 601 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 ERN2Q76MJ5 926 aaKnown RBP4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 AACSQ86V21 672 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 TDRPQ86YL5 185 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 SFTPA2Q8IWL1 248 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 DHX40Q8IX18 779 aaKnown RBP4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 ZNF619Q8N2I2 560 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 C10orf53Q8N6V4 93 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 TC2NQ8N9U0 490 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 MCUQ8NE86 351 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 GJC3Q8NFK1 279 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 FIBINQ8TAL6 211 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 ASB5Q8WWX0 329 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 KRT35Q92764 455 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 MR1Q95460 341 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 LRRC59Q96AG4 307 aaKnown RBP4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 PTERQ96BW5 349 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 GFM1Q96RP9 751 aaKnown RBP4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 SLC25A23Q9BV35 468 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 C1QTNF1Q9BXJ1 281 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 NUF2Q9BZD4 464 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 RBM38Q9H0Z9 239 aaKnown RBP4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 UBA2Q9UBT2 640 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 PLAGL1Q9UM63 463 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 KLHL20Q9Y2M5 609 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 CMAHPQ9Y471 501 aa4.48□□□□□ -1.69
HMGB1P48-201ENST00000446155 A0A1B0GVT2 93 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 A4D1N5 150 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 SEC14L5O43304 696 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 NTN1O95631 604 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 BMP15O95972 392 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 SNRNP70P08621 437 aaKnown RBP4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 SP100P23497 879 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 AMPHP49418 695 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 CLCN3P51790 818 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 CLCN5P51795 746 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 ABATP80404 500 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 TFAP4Q01664 338 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 ST3GAL1Q11201 340 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 GRIK3Q13003 919 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 PTK6Q13882 451 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 MORF4L2Q15014 288 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 NAB2Q15742 525 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 SOWAHAQ2M3V2 549 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms