RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 TMX2-CTNND1H3BSU7 103 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 CHUKO15111 745 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 STX7O15400 261 aaKnown RBP9.71□□□□□ -0.86
HDAC6-207ENST00000430858 USP12O75317 370 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 ZNF8P17098 575 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-207ENST00000430858 LSSP48449 732 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 MAZP56270 477 aaKnown RBP9.71□□□□□ -0.86
HDAC6-207ENST00000430858 CCL7P80098 99 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 PDE1BQ01064 536 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 BIRC2Q13490 618 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 ITGA9Q13797 1035 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 NR1D2Q14995 579 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 TAF1AQ15573 450 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-207ENST00000430858 P3H1Q32P28 736 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 ARHGEF18Q6ZSZ5 1173 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 CHST15Q7LFX5 561 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-207ENST00000430858 ZNF438Q7Z4V0 828 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 SPRED1Q7Z699 444 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 ADGRG6Q86SQ4 1221 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 SLC13A5Q86YT5 568 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-207ENST00000430858 SFTPA2Q8IWL1 248 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 ARL14Q8N4G2 192 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 TRIM58Q8NG06 486 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 BRSK1Q8TDC3 778 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 RTP4Q96DX8 246 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 TMEM74Q96NL1 305 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 C19orf43Q9BQ61 176 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 TMEM121Q9BTD3 319 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 OR2AG1Q9H205 316 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 POLR1BQ9H9Y6 1135 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 ARNT2Q9HBZ2 717 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 PRKAB1Q9Y478 270 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 PLEKHM1Q9Y4G2 1056 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 PCYT1BQ9Y5K3 369 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-207ENST00000430858 ENTPD2Q9Y5L3 495 aa9.71□□□□□ -0.86
HDAC6-207ENST00000430858 CHD8Q9HCK8 2581 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 MAP1BP46821 2468 aaKnown RBP9.7□□□□□ -0.86
HDAC6-207ENST00000430858 GLYATL1P3A0A0U1RQE8 302 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 GOLGA6L3A6NEY3 463 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 D6RAR5 112 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 PSMD3O43242 534 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 LIASO43766 372 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 BRINP1O60477 761 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 DXOO77932 396 aaKnown RBP9.7□□□□□ -0.86
HDAC6-207ENST00000430858 CDK14O94921 469 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 CRTAMO95727 393 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 MPOP05164 745 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 ACP5P13686 325 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 SLC2A4P14672 509 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 LPOP22079 712 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-207ENST00000430858 ACTN2P35609 894 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 GPR3P46089 330 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 FASLGP48023 281 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 CLCNKAP51800 687 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 PDX1P52945 283 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 GDF10P55107 478 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 GABREP78334 506 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 B4GALNT1Q00973 533 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 EIF3IQ13347 325 aaKnown RBP9.7□□□□□ -0.86
HDAC6-207ENST00000430858 CLPPQ16740 277 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-207ENST00000430858 TBC1D25Q3MII6 688 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 ATP13A5Q4VNC0 1218 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 ZNF648Q5T619 568 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-207ENST00000430858 KCTD11Q693B1 232 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 IGF2-ASQ6U949 168 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 FAM151BQ6UXP7 276 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 LRRTM4Q86VH4 590 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 SFRP1Q8N474 314 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 Q8N9G6 341 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-207ENST00000430858 GDAP1Q8TB36 358 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 ATXN7L3BQ96GX2 97 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 TTC25Q96NG3 672 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 TBL1YQ9BQ87 522 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 APOL2Q9BQE5 337 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 ZCCHC2Q9C0B9 1178 aaKnown RBP9.7□□□□□ -0.86
HDAC6-207ENST00000430858 STN1Q9H668 368 aaKnown RBP9.7□□□□□ -0.86
HDAC6-207ENST00000430858 LRRC40Q9H9A6 602 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 ARFGAP3Q9NP61 516 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 KCNK6Q9Y257 313 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 PPP2R2CQ9Y2T4 447 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 RAXQ9Y2V3 346 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 PCDHGA8Q9Y5G5 932 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 ARL5AQ9Y689 179 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 ASPMQ8IZT6 3477 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 ASXL3Q9C0F0 2248 aa9.7□□□□□ -0.86
HDAC6-207ENST00000430858 A0A087WV48 116 aa9.69□□□□□ -0.86
HDAC6-207ENST00000430858 CCDC187A0A096LP49 1063 aa9.69□□□□□ -0.86
HDAC6-207ENST00000430858 OR5K4A6NMS3 321 aa9.69□□□□□ -0.86
HDAC6-207ENST00000430858 GAPDHSO14556 408 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-207ENST00000430858 KMOO15229 486 aa9.69□□□□□ -0.86
HDAC6-207ENST00000430858 CASC3O15234 703 aaKnown RBP9.69□□□□□ -0.86
HDAC6-207ENST00000430858 PPM1DO15297 605 aa9.69□□□□□ -0.86
HDAC6-207ENST00000430858 B4GAT1O43505 415 aa9.69□□□□□ -0.86
HDAC6-207ENST00000430858 BUD23O43709 281 aaKnown RBP9.69□□□□□ -0.86
HDAC6-207ENST00000430858 MTX2O75431 263 aa9.69□□□□□ -0.86
HDAC6-207ENST00000430858 KRT37O76014 449 aa9.69□□□□□ -0.86
HDAC6-207ENST00000430858 PRAMEF1O95521 474 aa9.69□□□□□ -0.86
HDAC6-207ENST00000430858 METTL18O95568 372 aa9.69□□□□□ -0.86
HDAC6-207ENST00000430858 AP2A1O95782 977 aa9.69□□□□□ -0.86
HDAC6-207ENST00000430858 F3P13726 295 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms