RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 TRABDQ9H4I3 376 aa15.32■□□□□ 0.04
CTDSP1-202ENST00000428361 SPTLC3Q9NUV7 552 aa15.32■□□□□ 0.04
CTDSP1-202ENST00000428361 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.32■□□□□ 0.04
CTDSP1-202ENST00000428361 A0A0U1RQS6 177 aa15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 C3orf70A6NLC5 250 aaPredicted RBP15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 B4E171 279 aa15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 C9orf172C9J069 976 aa15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 NUAK1O60285 661 aa15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 SLC25A14O95258 325 aaPredicted RBP15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 NDST3O95803 873 aa15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 ATP1A1P05023 1023 aaKnown RBP15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 ACP5P13686 325 aa15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 F3P13726 295 aa15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 TSPAN7P41732 249 aa15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 CLCNKAP51800 687 aa15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 IHHQ14623 411 aa15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 TEX44Q53QW1 395 aa15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 WDR74Q6RFH5 385 aaPredicted RBP15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 PCSK4Q6UW60 755 aa15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 TMPRSS9Q7Z410 1059 aa15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 DTX1Q86Y01 620 aa15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 TFB1MQ8WVM0 346 aaKnown RBP15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 SMIM14Q96QK8 99 aa15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 VAT1Q99536 393 aa15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 ARHGAP9Q9BRR9 750 aa15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 ZPBPQ9BS86 351 aa15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 TRIM39Q9HCM9 518 aa15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 CNOT6Q9ULM6 557 aaKnown RBP15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 ZNF711Q9Y462 761 aa15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 ST14Q9Y5Y6 855 aa15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 ZFC3H1O60293 1989 aaKnown RBP15.31■□□□□ 0.04
CTDSP1-202ENST00000428361 MGAQ8IWI9 3026 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 FADS2P1A8MWK0 482 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 EFSO43281 561 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 VEGFDO43915 354 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 VCLP18206 1134 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 ETV5P41161 510 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 HADHBP55084 474 aaKnown RBP15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 DYNLT1P63172 113 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 PCSK7Q16549 785 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 DCAF12Q5T6F0 453 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 KIAA1614Q5VZ46 1190 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 IYDQ6PHW0 289 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 ZNF574Q6ZN55 896 aaPredicted RBP15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 TMC3Q7Z5M5 1100 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 RCBTB1Q8NDN9 531 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 P3H4Q92791 437 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 GLYATL1Q969I3 302 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 RNF25Q96BH1 459 aaPredicted RBP15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 CALR3Q96L12 384 aaKnown RBP15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 PLEKHG4BQ96PX9 1271 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 TRIB3Q96RU7 358 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 WDR24Q96S15 920 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 GLOD4Q9HC38 313 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 HACD3Q9P035 362 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 FOXJ2Q9P0K8 574 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 FAM153AQ9UHL3 310 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 PLEKHM1Q9Y4G2 1056 aa15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 OAS3Q9Y6K5 1087 aaKnown RBP15.3■□□□□ 0.04
CTDSP1-202ENST00000428361 LILRA5A6NI73 299 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 KMOO15229 486 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 EPOP01588 193 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 TNNT1P13805 278 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 COMTP21964 271 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 GTF2H3Q13889 308 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 TGIF1Q15583 401 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 INSCQ1MX18 579 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 TFDP3Q5H9I0 405 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 NKAIN2Q5VXU1 208 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 ALS2CLQ60I27 953 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 LRRTM4Q86VH4 590 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 ZFAND4Q86XD8 727 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 FAM129CQ86XR2 697 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 PLXDC1Q8IUK5 500 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 IL22RA1Q8N6P7 574 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 LRRN4Q8WUT4 740 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 TADA1Q96BN2 335 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 RBM41Q96IZ5 413 aaKnown RBP15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 TEKT5Q96M29 485 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 TIMM29Q9BSF4 260 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 EFHD1Q9BUP0 239 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 ZCCHC2Q9C0B9 1178 aaKnown RBP15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 UCK1Q9HA47 277 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 SLC39A1Q9NY26 324 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 PDP2Q9P2J9 529 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 ATXN10Q9UBB4 475 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 TBC1D29Q9UFV1 150 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 SHOC2Q9UQ13 582 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 KCNK6Q9Y257 313 aa15.29■□□□□ 0.04
CTDSP1-202ENST00000428361 KALRNO60229 2985 aa15.28■□□□□ 0.04
CTDSP1-202ENST00000428361 AGRPO00253 132 aa15.28■□□□□ 0.04
CTDSP1-202ENST00000428361 CAPN5O15484 640 aaPredicted RBP15.28■□□□□ 0.04
CTDSP1-202ENST00000428361 CST8O60676 142 aa15.28■□□□□ 0.04
CTDSP1-202ENST00000428361 SNX2O60749 519 aa15.28■□□□□ 0.04
CTDSP1-202ENST00000428361 KCNJ13O60928 360 aa15.28■□□□□ 0.04
CTDSP1-202ENST00000428361 ZNF189O75820 626 aaPredicted RBP15.28■□□□□ 0.04
CTDSP1-202ENST00000428361 ZRANB2O95218 330 aaKnown RBP eCLIP15.28■□□□□ 0.04
CTDSP1-202ENST00000428361 IPO7O95373 1038 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms