RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 UBXN10Q96LJ8 280 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 MUS81Q96NY9 551 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 CSF3RQ99062 836 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 SLC39A8Q9C0K1 460 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 SMPD3Q9NY59 655 aaPredicted RBP14.27□□□□□ -0.12
MSH5-206ENST00000423982 MARCH4Q9P2E8 410 aaPredicted RBP14.27□□□□□ -0.12
MSH5-206ENST00000423982 TBX21Q9UL17 535 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 NDUFAF1Q9Y375 327 aa14.27□□□□□ -0.12
MSH5-206ENST00000423982 RALGAPA2Q2PPJ7 1873 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 AQP12BA6NM10 295 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 CACNG3O60359 315 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 ZNF623O75123 536 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 ADRA1AP35348 466 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 BRCC3P46736 316 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 RPS9P46781 194 aaKnown RBP14.27□□□□□ -0.13
MSH5-206ENST00000423982 ACADVLP49748 655 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 GSK3BP49841 420 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 ARSDP51689 593 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 PTPRCAPQ14761 206 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 XKR4Q5GH76 650 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 EGFLAMQ63HQ2 1017 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 GRAMD4Q6IC98 578 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 LCN8Q6JVE9 175 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 SCIMPQ6UWF3 145 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 ZNF598Q86UK7 904 aaKnown RBP14.27□□□□□ -0.13
MSH5-206ENST00000423982 ITIH5Q86UX2 942 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 AQP12AQ8IXF9 295 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 ABI1Q8IZP0 508 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 TWIST2Q8WVJ9 160 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 PCED1BQ96HM7 432 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 SLC30A3Q99726 388 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 RBM22Q9NW64 420 aaKnown RBP eCLIP14.27□□□□□ -0.132e-13■■■■■ 57.4
MSH5-206ENST00000423982 ACTR3BQ9P1U1 418 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 KCTD3Q9Y597 815 aa14.27□□□□□ -0.13
MSH5-206ENST00000423982 MIA3Q5JRA6 1907 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 H0Y858 1186 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 MAFKO60675 156 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 BAIAP3O94812 1187 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 SHMT2P34897 504 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 KPNA2P52292 529 aaKnown RBP14.26□□□□□ -0.13
MSH5-206ENST00000423982 PAGE3Q5JUK9 113 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 BHLHA9Q7RTU4 235 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 MRPL10Q7Z7H8 261 aaKnown RBP14.26□□□□□ -0.13
MSH5-206ENST00000423982 OR6P1Q8NGX9 317 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 TUBGCP3Q96CW5 907 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 FEM1CQ96JP0 617 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 ZNF560Q96MR9 790 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 FCRL5Q96RD9 977 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 TLR9Q9NR96 1032 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 NUDT5Q9UKK9 219 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 LRFN2Q9ULH4 789 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 NEU3Q9UQ49 428 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 DGKBQ9Y6T7 804 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 TTC3P53804 2025 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 FNDC1Q4ZHG4 1894 aaPredicted RBP14.26□□□□□ -0.13
MSH5-206ENST00000423982 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.26□□□□□ -0.13
MSH5-206ENST00000423982 ASPDHA6ND91 283 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 UBXN8O00124 270 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 AXIN1O15169 862 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 PCNAP12004 261 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 HGFP14210 728 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 RFC2P35250 354 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 PHYKPLQ8IUZ5 450 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 MIER2Q8N344 545 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 PTGR2Q8N8N7 351 aaPredicted RBP14.26□□□□□ -0.13
MSH5-206ENST00000423982 ZNF420Q8TAQ5 688 aaPredicted RBP14.26□□□□□ -0.13
MSH5-206ENST00000423982 SNX19Q92543 992 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 POLR3BQ9NW08 1133 aaPredicted RBP14.26□□□□□ -0.13
MSH5-206ENST00000423982 TIMM22Q9Y584 194 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 PCDHB7Q9Y5E2 793 aa14.26□□□□□ -0.13
MSH5-206ENST00000423982 EYSQ5T1H1 3165 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 TCRBV5S2A0A599 114 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 NT5C1B-RDH14C9J2C7 533 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 HSD17B1P14061 328 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 SYN1P17600 705 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 DNAJB1P25685 340 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 OR1G1P47890 313 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 PHEXP78562 749 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 IHHQ14623 411 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 PFKFB4Q16877 469 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 INTS6LQ5JSJ4 861 aaKnown RBP14.25□□□□□ -0.13
MSH5-206ENST00000423982 TMTC4Q5T4D3 741 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 KIAA0930Q6ICG6 404 aaPredicted RBP14.25□□□□□ -0.13
MSH5-206ENST00000423982 RANBP10Q6VN20 620 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 OTOP2Q7RTS6 562 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 PIWIL3Q7Z3Z3 882 aaKnown RBP14.25□□□□□ -0.13
MSH5-206ENST00000423982 TMEM125Q96AQ2 219 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 ALG2Q9H553 416 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 MPP6Q9NZW5 540 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 ZNF232Q9UNY5 417 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 VWA7Q9Y334 891 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 PCDHA9Q9Y5H5 950 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 NYNRINQ9P2P1 1898 aaKnown RBP14.25□□□□□ -0.13
MSH5-206ENST00000423982 SYNCRIPO60506 623 aaKnown RBP14.25□□□□□ -0.13
MSH5-206ENST00000423982 RSL1D1O76021 490 aaKnown RBP14.25□□□□□ -0.13
MSH5-206ENST00000423982 RBP1P09455 135 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 TCF3P15923 654 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 IL7RP16871 459 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 CCNA2P20248 432 aa14.25□□□□□ -0.13
MSH5-206ENST00000423982 HALP42357 657 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms