RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 LRP8Q14114 963 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 ATP13A5Q4VNC0 1218 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 ZNF569Q5MCW4 686 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 SLC30A9Q6PML9 568 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 TMPRSS9Q7Z410 1059 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 SLC13A5Q86YT5 568 aaPredicted RBP20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 ZNF547Q8IVP9 402 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 FAM71DQ8N9W8 422 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 ZDHHC1Q8WTX9 485 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 UBE2Q2Q8WVN8 375 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 DEPDC7Q96QD5 511 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 APOL2Q9BQE5 337 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 TMEM121Q9BTD3 319 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 CARD9Q9H257 536 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 LZTFL1Q9NQ48 299 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 RAD18Q9NS91 495 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 HACD3Q9P035 362 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 GPSM3Q9Y4H4 160 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 KCTD3Q9Y597 815 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 KIF26BQ2KJY2 2108 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 DSPP15924 2871 aaKnown RBP20.4■□□□□ 0.86
PKNOX1-202ENST00000418336 BUD23O43709 281 aaKnown RBP20.4■□□□□ 0.86
PKNOX1-202ENST00000418336 TLX3O43711 291 aaPredicted RBP20.4■□□□□ 0.86
PKNOX1-202ENST00000418336 LIASO43766 372 aa20.4■□□□□ 0.86
PKNOX1-202ENST00000418336 ECEL1O95672 775 aa20.4■□□□□ 0.86
PKNOX1-202ENST00000418336 CCDC70Q6NSX1 233 aa20.4■□□□□ 0.86
PKNOX1-202ENST00000418336 SPRED1Q7Z699 444 aa20.4■□□□□ 0.86
PKNOX1-202ENST00000418336 C11orf96Q7Z7L8 435 aa20.4■□□□□ 0.86
PKNOX1-202ENST00000418336 B3GNT8Q7Z7M8 397 aa20.4■□□□□ 0.86
PKNOX1-202ENST00000418336 GALNT13Q8IUC8 556 aa20.4■□□□□ 0.86
PKNOX1-202ENST00000418336 ARL14Q8N4G2 192 aa20.4■□□□□ 0.86
PKNOX1-202ENST00000418336 OR6C4Q8NGE1 309 aa20.4■□□□□ 0.86
PKNOX1-202ENST00000418336 BLOC1S5Q8TDH9 187 aa20.4■□□□□ 0.86
PKNOX1-202ENST00000418336 NXPE2Q96DL1 559 aa20.4■□□□□ 0.86
PKNOX1-202ENST00000418336 ABCG4Q9H172 646 aa20.4■□□□□ 0.86
PKNOX1-202ENST00000418336 RMI1Q9H9A7 625 aa20.4■□□□□ 0.86
PKNOX1-202ENST00000418336 TRIM39Q9HCM9 518 aa20.4■□□□□ 0.86
PKNOX1-202ENST00000418336 LRIT1Q9P2V4 623 aa20.4■□□□□ 0.86
PKNOX1-202ENST00000418336 PPP2R2CQ9Y2T4 447 aa20.4■□□□□ 0.86
PKNOX1-202ENST00000418336 AAR2Q9Y312 384 aaKnown RBP20.4■□□□□ 0.86
PKNOX1-202ENST00000418336 ARL5AQ9Y689 179 aa20.4■□□□□ 0.86
PKNOX1-202ENST00000418336 PPM1DO15297 605 aa20.39■□□□□ 0.85
PKNOX1-202ENST00000418336 B4GAT1O43505 415 aa20.39■□□□□ 0.85
PKNOX1-202ENST00000418336 RPLP0P05388 317 aaKnown RBP20.39■□□□□ 0.85
PKNOX1-202ENST00000418336 ACTR1BP42025 376 aa20.39■□□□□ 0.85
PKNOX1-202ENST00000418336 ACTR1AP61163 376 aa20.39■□□□□ 0.85
PKNOX1-202ENST00000418336 RBM44Q6ZP01 1051 aaKnown RBP20.39■□□□□ 0.85
PKNOX1-202ENST00000418336 GLT6D1Q7Z4J2 308 aa20.39■□□□□ 0.85
PKNOX1-202ENST00000418336 ATXN7L3BQ96GX2 97 aa20.39■□□□□ 0.85
PKNOX1-202ENST00000418336 FSD1LQ9BXM9 530 aa20.39■□□□□ 0.85
PKNOX1-202ENST00000418336 OR2AG1Q9H205 316 aa20.39■□□□□ 0.85
PKNOX1-202ENST00000418336 SLC23A2Q9UGH3 650 aa20.39■□□□□ 0.85
PKNOX1-202ENST00000418336 RAXQ9Y2V3 346 aa20.39■□□□□ 0.85
PKNOX1-202ENST00000418336 GOLGA6L9A6NEM1 432 aa20.38■□□□□ 0.85
PKNOX1-202ENST00000418336 D6RAR5 112 aa20.38■□□□□ 0.85
PKNOX1-202ENST00000418336 BRINP1O60477 761 aa20.38■□□□□ 0.85
PKNOX1-202ENST00000418336 USP12O75317 370 aa20.38■□□□□ 0.85
PKNOX1-202ENST00000418336 MTX2O75431 263 aa20.38■□□□□ 0.85
PKNOX1-202ENST00000418336 ZNF189O75820 626 aaPredicted RBP20.38■□□□□ 0.85
PKNOX1-202ENST00000418336 DXOO77932 396 aaKnown RBP20.38■□□□□ 0.85
PKNOX1-202ENST00000418336 ASMTLO95671 621 aa20.38■□□□□ 0.85
PKNOX1-202ENST00000418336 SPAM1P38567 509 aa20.38■□□□□ 0.85
PKNOX1-202ENST00000418336 CLCNKAP51800 687 aa20.38■□□□□ 0.85
PKNOX1-202ENST00000418336 XIAPP98170 497 aa20.38■□□□□ 0.85
PKNOX1-202ENST00000418336 SPARCL1Q14515 664 aa20.38■□□□□ 0.85
PKNOX1-202ENST00000418336 PARP6Q2NL67 630 aa20.38■□□□□ 0.85
PKNOX1-202ENST00000418336 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.38■□□□□ 0.85
PKNOX1-202ENST00000418336 MICALCLQ6ZW33 695 aa20.38■□□□□ 0.85
PKNOX1-202ENST00000418336 CCNJLQ8IV13 435 aa20.38■□□□□ 0.85
PKNOX1-202ENST00000418336 SFRP1Q8N474 314 aa20.38■□□□□ 0.85
PKNOX1-202ENST00000418336 WDR48Q8TAF3 677 aa20.38■□□□□ 0.85
PKNOX1-202ENST00000418336 KCNF1Q9H3M0 494 aa20.38■□□□□ 0.85
PKNOX1-202ENST00000418336 LRRN3Q9H3W5 708 aa20.38■□□□□ 0.85
PKNOX1-202ENST00000418336 TBC1D29Q9UFV1 150 aa20.38■□□□□ 0.85
PKNOX1-202ENST00000418336 UNC13CQ8NB66 2214 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 GPR89AB7ZAQ6 455 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 GRID2O43424 1007 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 UGT1A9O60656 530 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 SLC25A14O95258 325 aaPredicted RBP20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 GPR89BP0CG08 455 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 UGT1A6P19224 532 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 UGT1A1P22309 533 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 UGT1A4P22310 534 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 UGT1A3P35503 534 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 UGT1A5P35504 534 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 ZNF140P52738 457 aaPredicted RBP20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 RPS6KA1Q15418 735 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 TAF1AQ15573 450 aaPredicted RBP20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 CHRNA6Q15825 494 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 IGF2-ASQ6U949 168 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 XKR5Q6UX68 686 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 CHST15Q7LFX5 561 aaPredicted RBP20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 PHYKPLQ8IUZ5 450 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 GLIS1Q8NBF1 620 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 TBL1YQ9BQ87 522 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 FERMT1Q9BQL6 677 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 UGT1A7Q9HAW7 530 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 UGT1A10Q9HAW8 530 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 UGT1A8Q9HAW9 530 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 ASCL3Q9NQ33 180 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms