RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 GPRIN3Q6ZVF9 776 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 GPR141Q7Z602 305 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 COLGALT2Q8IYK4 626 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 PACRGLQ8N7B6 248 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 CDK5RAP1Q96SZ6 601 aaKnown RBP11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 POLR3BQ9NW08 1133 aaPredicted RBP11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 GMPR2Q9P2T1 348 aaKnown RBP11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 ATXN10Q9UBB4 475 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 AGO1Q9UL18 857 aaKnown RBP11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 RIMKLBQ9ULI2 386 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 SLC30A1Q9Y6M5 507 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 ZFP37Q9Y6Q3 630 aaPredicted RBP11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 SOCS2O14508 198 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 ARPC2O15144 300 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 CLOCKO15516 846 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 ACSL4O60488 711 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 ESRRBO95718 433 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 SLC6A2P23975 617 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 FOXM1Q08050 763 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 CLLU1OSQ5K130 101 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 TMTC4Q5T4D3 741 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 UGT3A1Q6NUS8 523 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 BLOC1S3Q6QNY0 202 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 CYHR1Q6ZMK1 362 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 DCBLD1Q8N8Z6 715 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 ESAMQ96AP7 390 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 LINGO1Q96FE5 620 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 PSKH2Q96QS6 385 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 SEPHS2Q99611 448 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 NUSAP1Q9BXS6 441 aaKnown RBP11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 BPIFA1Q9NP55 256 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 ANAPC2Q9UJX6 822 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 PKP3Q9Y446 797 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 ANGPTL3Q9Y5C1 460 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 PCDHGC4Q9Y5F7 938 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 ZNF236Q9UL36 1845 aa11.62□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 H3BNH8 94 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 B4GALT3O60512 393 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 LDLRP01130 860 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 SUOXP51687 545 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 LIPEQ05469 1076 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 DSC1Q08554 894 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 PRKG2Q13237 762 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 CARM1Q86X55 608 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 DENND1CQ8IV53 801 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 KLHDC9Q8NEP7 349 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 B4GALNT2Q8NHY0 566 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 METTL6Q8TCB7 284 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 HM13Q8TCT9 377 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 DUS3LQ96G46 650 aaKnown RBP11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 VPS50Q96JG6 964 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 ADI1Q9BV57 179 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 ANKRD60Q9BZ19 345 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 RNF11Q9Y3C5 154 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 TMEM189-UBE2V1I3L0A0 370 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 NOL3O60936 208 aaKnown RBP11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 CHRM1P11229 460 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 UGT1A6P19224 532 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 RPS6KA3P51812 740 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 POLR2JP52435 117 aaKnown RBP11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 RPS24P62847 133 aaKnown RBP11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 APOFQ13790 326 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 TYSND1Q2T9J0 566 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 TRPV3Q8NET8 790 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 TSPEARQ8WU66 669 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 SLC45A3Q96JT2 553 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 SLC2A11Q9BYW1 496 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 TRIM8Q9BZR9 551 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 MUC13Q9H3R2 512 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 GALPQ9UBC7 116 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 OAZ3Q9UMX2 235 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 FAF1Q9UNN5 650 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 PCDHB7Q9Y5E2 793 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 H7C4K7 107 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 CLDN11O75508 207 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 MTHFD1P11586 935 aaKnown RBP11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 PRKAR2AP13861 404 aaKnown RBP11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 GSK3BP49841 420 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 AGTR2P50052 363 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 CDH4P55283 916 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 TRIM32Q13049 653 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 RABL3Q5HYI8 236 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 COQ5Q5HYK3 327 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 CST9Q5W186 159 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 DHRSXQ8N5I4 330 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 SIDT2Q8NBJ9 832 aaKnown RBP11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 FUBP1Q96AE4 644 aaKnown RBP11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 UHRF1Q96T88 793 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 ACOX2Q99424 681 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 GPR63Q9BZJ6 419 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 TUBB1Q9H4B7 451 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 TIMMDC1Q9NPL8 285 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 CMTM6Q9NX76 183 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 GABRQQ9UN88 632 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 SPO11Q9Y5K1 396 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 RAI2Q9Y5P3 530 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 ACTL7AQ9Y615 435 aa11.61□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 MTMR11A4FU01 709 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 ENPP3O14638 875 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 STX16O14662 325 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms