RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 GPR3P46089 330 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 MARCKSL1P49006 195 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 NAP1L1P55209 391 aaKnown RBP13.29□□□□□ -0.28
VCX3A-202ENST00000398729 DCDC1P59894 354 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 ZFP36L1Q07352 338 aaKnown RBP13.29□□□□□ -0.28
VCX3A-202ENST00000398729 ADCY2Q08462 1091 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 WASHC5Q12768 1159 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 NR1D2Q14995 579 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 PPP2R5EQ16537 467 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 CLPPQ16740 277 aaPredicted RBP13.29□□□□□ -0.28
VCX3A-202ENST00000398729 AMZ1Q400G9 498 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 ALS2CLQ60I27 953 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 TMC3Q7Z5M5 1100 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 CLEC14AQ86T13 490 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 PIM3Q86V86 326 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 PATE1Q8WXA2 126 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 KRT35Q92764 455 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 TMEM159Q96B96 161 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 HAUS1Q96CS2 278 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 EID2BQ96D98 161 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 MED8Q96G25 268 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 VAT1Q99536 393 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 ZSCAN5AQ9BUG6 496 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 SPATA16Q9BXB7 569 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 UBP1Q9NZI7 540 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 KLHL8Q9P2G9 620 aaPredicted RBP13.29□□□□□ -0.28
VCX3A-202ENST00000398729 FAM153AQ9UHL3 310 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 OAS3Q9Y6K5 1087 aaKnown RBP13.29□□□□□ -0.28
VCX3A-202ENST00000398729 ZFC3H1O60293 1989 aaKnown RBP13.29□□□□□ -0.28
VCX3A-202ENST00000398729 HACD1B0YJ81 288 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 K7ENP7 123 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 EFSO43281 561 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 B4GAT1O43505 415 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 WISP1O95388 367 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 FECHP22830 423 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 CD68P34810 354 aaPredicted RBP13.28□□□□□ -0.28
VCX3A-202ENST00000398729 UGT1A5P35504 534 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 OR1D5P58170 312 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 COPS2P61201 443 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 ZNF569Q5MCW4 686 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 PHF19Q5T6S3 580 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 CCDC181Q5TID7 509 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 KIAA1614Q5VZ46 1190 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 PDPK2PQ6A1A2 396 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 INO80CQ6PI98 192 aaPredicted RBP13.28□□□□□ -0.28
VCX3A-202ENST00000398729 CHST15Q7LFX5 561 aaPredicted RBP13.28□□□□□ -0.28
VCX3A-202ENST00000398729 PID1Q7Z2X4 250 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 TRAM1L1Q8N609 369 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 GPR26Q8NDV2 337 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 HTR3CQ8WXA8 447 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 CMKLR1Q99788 373 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 HEMGNQ9BXL5 484 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 CARD9Q9H257 536 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 RDH14Q9HBH5 336 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 AKAP7Q9P0M2 348 aaPredicted RBP13.28□□□□□ -0.28
VCX3A-202ENST00000398729 NFKBIL1Q9UBC1 381 aaPredicted RBP13.28□□□□□ -0.28
VCX3A-202ENST00000398729 PRKAB1Q9Y478 270 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 LOXL2Q9Y4K0 774 aa13.28□□□□□ -0.28
VCX3A-202ENST00000398729 RCCD1A6NED2 376 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 BTNL10A8MVZ5 291 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 GPR89AB7ZAQ6 455 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 PPM1DO15297 605 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 GRID2O43424 1007 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 NUAK1O60285 661 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 SLC25A14O95258 325 aaPredicted RBP13.27□□□□□ -0.29
VCX3A-202ENST00000398729 EPOP01588 193 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 GPR89BP0CG08 455 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 NFKB1P19838 968 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 CTNNA1P35221 906 aaKnown RBP13.27□□□□□ -0.29
VCX3A-202ENST00000398729 FASLGP48023 281 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 WNT3AP56704 352 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 XRCC4Q13426 336 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 BBS12Q6ZW61 710 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 USP53Q70EK8 1073 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 TMPRSS9Q7Z410 1059 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 JAMLQ86YT9 394 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 SLITRK4Q8IW52 837 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 ZNF567Q8N184 647 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 EXD3Q8N9H8 876 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 QKIQ96PU8 341 aaKnown RBP eCLIP13.27□□□□□ -0.29
VCX3A-202ENST00000398729 FCRL5Q96RD9 977 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 FERMT1Q9BQL6 677 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 SEMA6CQ9H3T2 930 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 TRIM39Q9HCM9 518 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.27□□□□□ -0.29
VCX3A-202ENST00000398729 ATXN10Q9UBB4 475 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 PISDQ9UG56 409 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 TRHDEQ9UKU6 1024 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 EFR3BQ9Y2G0 817 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 PCDHGA7Q9Y5G6 932 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 PCDHA3Q9Y5H8 950 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 TEX15Q9BXT5 2789 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 LRRK2Q5S007 2527 aa13.27□□□□□ -0.29
VCX3A-202ENST00000398729 LOC285095A0A1B0GVY8 99 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 CCDC66A2RUB6 948 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 H7C0C1 242 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 APOC4-APOC2K7ER74 178 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 APOC2P02655 101 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 ACP5P13686 325 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 HGFP14210 728 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms