RNA–Protein interactions for RNA: ENST00000398465.3

VPREB3-202, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

TSL 3 BASIC

Gene VPREB3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-202ENST00000398465 PSMD3O43242 534 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 SLC25A14O95258 325 aaPredicted RBP12.64□□□□□ -0.39
VPREB3-202ENST00000398465 METTL18O95568 372 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 MT-CO3P00414 261 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 LPOP22079 712 aaPredicted RBP12.64□□□□□ -0.39
VPREB3-202ENST00000398465 MSNP26038 577 aaKnown RBP12.64□□□□□ -0.39
VPREB3-202ENST00000398465 AK4P27144 223 aaPredicted RBP12.64□□□□□ -0.39
VPREB3-202ENST00000398465 ACTN2P35609 894 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 ACTR1BP42025 376 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 ACTR1AP61163 376 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 NR1D2Q14995 579 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 SIX1Q15475 284 aaPredicted RBP12.64□□□□□ -0.39
VPREB3-202ENST00000398465 CCNG2Q16589 344 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 ST3GAL2Q16842 350 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 ATP13A5Q4VNC0 1218 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 SLC30A9Q6PML9 568 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 RBM44Q6ZP01 1051 aaKnown RBP12.64□□□□□ -0.39
VPREB3-202ENST00000398465 MARK2Q7KZI7 788 aaKnown RBP12.64□□□□□ -0.39
VPREB3-202ENST00000398465 ZNF438Q7Z4V0 828 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 DDHD1Q8NEL9 900 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 BRSK1Q8TDC3 778 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 ZDHHC1Q8WTX9 485 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 APOL2Q9BQE5 337 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 NRSN2Q9GZP1 204 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 KCNF1Q9H3M0 494 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 TRIM39Q9HCM9 518 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 IL26Q9NPH9 171 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 JRKLQ9Y4A0 524 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 GPSM3Q9Y4H4 160 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 ST14Q9Y5Y6 855 aa12.64□□□□□ -0.39
VPREB3-202ENST00000398465 APC2O95996 2303 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 NTN3O00634 580 aaPredicted RBP12.63□□□□□ -0.39
VPREB3-202ENST00000398465 GAPDHSO14556 408 aaPredicted RBP12.63□□□□□ -0.39
VPREB3-202ENST00000398465 STX7O15400 261 aaKnown RBP12.63□□□□□ -0.39
VPREB3-202ENST00000398465 GRID2O43424 1007 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 PRAMEF1O95521 474 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 FGGP02679 453 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 CAPNS1P04632 268 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 SLC2A4P14672 509 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 ZNF8P17098 575 aaPredicted RBP12.63□□□□□ -0.39
VPREB3-202ENST00000398465 FDFT1P37268 417 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 HADHAP40939 763 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 CLCNKAP51800 687 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 ZNF140P52738 457 aaPredicted RBP12.63□□□□□ -0.39
VPREB3-202ENST00000398465 CLDN6P56747 220 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 TARDBPQ13148 414 aaKnown RBP eCLIP12.63□□□□□ -0.39
VPREB3-202ENST00000398465 MSLNQ13421 630 aaPredicted RBP12.63□□□□□ -0.39
VPREB3-202ENST00000398465 OLIG2Q13516 323 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 SPIDRQ14159 915 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 RTP5Q14D33 572 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 LDLRAP1Q5SW96 308 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 DENND5AQ6IQ26 1287 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 FAM151BQ6UXP7 276 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 ADGRG6Q86SQ4 1221 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 LINC00523Q86TU6 105 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 CCDC89Q8N998 374 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 TIMM29Q9BSF4 260 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 CCDC86Q9H6F5 360 aaKnown RBP12.63□□□□□ -0.39
VPREB3-202ENST00000398465 BPIFA1Q9NP55 256 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 HOMER3Q9NSC5 361 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 SPATS2LQ9NUQ6 558 aaKnown RBP12.63□□□□□ -0.39
VPREB3-202ENST00000398465 PAK5Q9P286 719 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 ATXN10Q9UBB4 475 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 ZNF148Q9UQR1 794 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 PCYT1BQ9Y5K3 369 aaPredicted RBP12.63□□□□□ -0.39
VPREB3-202ENST00000398465 ARL5AQ9Y689 179 aa12.63□□□□□ -0.39
VPREB3-202ENST00000398465 UNC13CQ8NB66 2214 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 PKD1L2Q7Z442 2459 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 PIKFYVEQ9Y2I7 2098 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 D6RAR5 112 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 ZW10O43264 779 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 USP12O75317 370 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 CSO75390 466 aaKnown RBP12.62□□□□□ -0.39
VPREB3-202ENST00000398465 SUN1O94901 812 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 IFNB1P01574 187 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 ACP5P13686 325 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 FASLGP48023 281 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 SEMA5AQ13591 1074 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 GTF2H3Q13889 308 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 CLPPQ16740 277 aaPredicted RBP12.62□□□□□ -0.39
VPREB3-202ENST00000398465 ISXQ2M1V0 245 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 C4orf22Q6V702 233 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 CHST15Q7LFX5 561 aaPredicted RBP12.62□□□□□ -0.39
VPREB3-202ENST00000398465 SPRED1Q7Z699 444 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 LRRTM4Q86VH4 590 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 PROSER1Q86XN7 944 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 CCNJLQ8IV13 435 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 NAGSQ8N159 534 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 AVL9Q8NBF6 648 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 C1orf54Q8WWF1 131 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 OR2AG1Q9H205 316 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 EIF2B3Q9NR50 452 aaKnown RBP12.62□□□□□ -0.39
VPREB3-202ENST00000398465 ZNHIT2Q9UHR6 403 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 RABGEF1Q9UJ41 708 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 RNF215Q9Y6U7 377 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 CACNA1BQ00975 2339 aa12.62□□□□□ -0.39
VPREB3-202ENST00000398465 KIF26BQ2KJY2 2108 aa12.61□□□□□ -0.39
VPREB3-202ENST00000398465 A6NCN8 305 aa12.61□□□□□ -0.39
VPREB3-202ENST00000398465 TRABD2BA6NFA1 517 aa12.61□□□□□ -0.39
VPREB3-202ENST00000398465 AGAP14A8MT82 685 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms