RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 PLEKHG4BQ96PX9 1271 aa13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 MCCC1Q96RQ3 725 aaPredicted RBP13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 TMUB1Q9BVT8 246 aa13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 RAB33BQ9H082 229 aa13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 ILKAPQ9H0C8 392 aaPredicted RBP13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 ZNF552Q9H707 407 aaPredicted RBP13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 CHST11Q9NPF2 352 aa13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 AGPAT4Q9NRZ5 378 aa13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 SCHIP1Q9P0W5 487 aaPredicted RBP13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 AJAP1Q9UKB5 411 aaPredicted RBP13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 RARRES3Q9UL19 164 aa13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 TCFL5Q9UL49 500 aa13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 SPTBP11277 2137 aa13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 NPIPB15A6NHN6 443 aaPredicted RBP13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 OR5K4A6NMS3 321 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 XRCC1P18887 633 aaPredicted RBP13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 KRT9P35527 623 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 USP8P40818 1118 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 GPR1P46091 355 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 CLCNKAP51800 687 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 TUBB3Q13509 450 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 CACHD1Q5VU97 1274 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 CYB5D1Q6P9G0 228 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 CDH24Q86UP0 819 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 PYROXD2Q8N2H3 581 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 LZTR1Q8N653 840 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 ENDOVQ8N8Q3 282 aaKnown RBP13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 AVL9Q8NBF6 648 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 RSC1A1Q92681 617 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 FAM81BQ96LP2 452 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 LRFN5Q96NI6 719 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 AGAP2Q99490 1192 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 SLX1AQ9BQ83 275 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 ABCG8Q9H221 673 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 CHST8Q9H2A9 424 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 GOLPH3LQ9H4A5 285 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 ZBTB20Q9HC78 741 aaPredicted RBP13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 PDE7BQ9NP56 450 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 VPS18Q9P253 973 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 CNOT6Q9ULM6 557 aaKnown RBP13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 KCNK6Q9Y257 313 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 PRKAB1Q9Y478 270 aa13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 NSD1Q96L73 2696 aaPredicted RBP13.47□□□□□ -0.25
VCPKMT-201ENST00000395859 IGHV5-51A0A0C4DH38 117 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 F5H423 210 aaPredicted RBP13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 CPNE3O75131 537 aaKnown RBP13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 FAM155BO75949 473 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 SNRPB2P08579 225 aaKnown RBP13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 SLC2A4P14672 509 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 COX6B1P14854 86 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 HTR1EP28566 365 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 EPHB2P29323 1055 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 SSTR2P30874 369 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 SLC19A1P41440 591 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 GLRBP48167 497 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 RRADP55042 308 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 PNOCQ13519 176 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 ATP1A4Q13733 1029 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 MYBPC3Q14896 1274 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 PTPRRQ15256 657 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 LLGL1Q15334 1064 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 TMCO4Q5TGY1 634 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 LYPLAL1Q5VWZ2 237 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 TTI2Q6NXR4 508 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 STRADAQ7RTN6 431 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 TSPAN33Q86UF1 283 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 TMEM35BQ8NCS4 154 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 FAR1Q8WVX9 515 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 NLNQ9BYT8 704 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 WASH6PQ9NQA3 447 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 ZNF624Q9P2J8 865 aaPredicted RBP13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 APEX2Q9UBZ4 518 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 ZNHIT2Q9UHR6 403 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 PPIL1Q9Y3C6 166 aa13.46□□□□□ -0.25
VCPKMT-201ENST00000395859 C2CD4BA6NLJ0 364 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 GOLGA8SH3BPF8 625 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 RASSF9O75901 435 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 ZNF202O95125 648 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 CD44P16070 742 aaKnown RBP13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 SLC9A1P19634 815 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 PTPN9P43378 593 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 SOX8P57073 446 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 AP1S1P61966 158 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 PPP1CAP62136 330 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 KRT85P78386 507 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 KCNAB1Q14722 419 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 CDO1Q16878 200 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 PLEKHS1Q5SXH7 462 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 DENND2CQ68D51 928 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 FAM198BQ6UWH4 519 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 CERS6Q6ZMG9 384 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 SPOCD1Q6ZMY3 1216 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 ZNF765Q7L2R6 523 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 CHST15Q7LFX5 561 aaPredicted RBP13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 NXPE1Q8N323 547 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 GRHL3Q8TE85 626 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 RXFP2Q8WXD0 754 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 NANOS1Q8WY41 292 aaKnown RBP13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 MR1Q95460 341 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 SCAMP4Q969E2 229 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms