RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 OR6Y1Q8NGX8 325 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 HUS1BQ8NHY5 278 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 SLC44A1Q8WWI5 657 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 RAB40AQ8WXH6 277 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 RUBCNQ92622 972 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 PHF21AQ96BD5 680 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 GRAMD2BQ96HH9 432 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 OXNAD1Q96HP4 312 aaPredicted RBP0.48□□□□□ -2.33
SNORD28-201ENST00000384706 TMEM41AQ96HV5 264 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 CYYR1Q96J86 154 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 TNIP3Q96KP6 325 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 PRMT6Q96LA8 375 aaPredicted RBP0.48□□□□□ -2.33
SNORD28-201ENST00000384706 BBS4Q96RK4 519 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 SH3GL2Q99962 352 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 EIF2AK1Q9BQI3 630 aaKnown RBP0.48□□□□□ -2.33
SNORD28-201ENST00000384706 GPATCH1Q9BRR8 931 aaKnown RBP0.48□□□□□ -2.33
SNORD28-201ENST00000384706 RAB11FIP5Q9BXF6 653 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 LAT2Q9GZY6 243 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 LMAN2LQ9H0V9 348 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 UPF3AQ9H1J1 476 aaKnown RBP0.48□□□□□ -2.33
SNORD28-201ENST00000384706 EPHX3Q9H6B9 360 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 VEZTQ9HBM0 779 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 ARFGAP3Q9NP61 516 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 HINT3Q9NQE9 182 aaKnown RBP0.48□□□□□ -2.33
SNORD28-201ENST00000384706 ZNF71Q9NQZ8 489 aaPredicted RBP0.48□□□□□ -2.33
SNORD28-201ENST00000384706 SNTG1Q9NSN8 517 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 ECHDC1Q9NTX5 307 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 SLC38A7Q9NVC3 462 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 ALKBH4Q9NXW9 302 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 IL1RAPL1Q9NZN1 696 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 PEMTQ9UBM1 199 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 DNAJB4Q9UDY4 337 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 EPHA6Q9UF33 1036 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 LIMA1Q9UHB6 759 aaKnown RBP0.48□□□□□ -2.33
SNORD28-201ENST00000384706 CD207Q9UJ71 328 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 FBXL2Q9UKC9 423 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 SUFUQ9UMX1 484 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 NTNG1Q9Y2I2 539 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 FAM96BQ9Y3D0 163 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 MYH15Q9Y2K3 1946 aa0.48□□□□□ -2.33
SNORD28-201ENST00000384706 PRAG1Q86YV5 1406 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 SOS1Q07889 1333 aaPredicted RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 COL16A1Q07092 1604 aaPredicted RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 IGHV4-4A0A075B6R2 117 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 GIMAP1-GIMAP5A0A087WTJ2 511 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 A0A0G2JNG1 304 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 TMEM129A0AVI4 362 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 C5orf60A6NFR6 353 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 H0YIN7 160 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 PEX12O00623 359 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 HS3ST1O14792 307 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 SLC22A2O15244 555 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 SEC14L5O43304 696 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 NBNO60934 754 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 AP2A2O94973 939 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 NADKO95544 446 aaPredicted RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 MLYCDO95822 493 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 MT-CYBP00156 380 aaPredicted RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 IGHV3-13P01766 116 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 PRB2P02812 416 aaPredicted RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 TFAP2AP05549 437 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 LIPFP07098 398 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 NBPF7P0C2Y1 421 aaPredicted RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 LIFP15018 202 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 ITIH1P19827 911 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 UGT1A4P22310 534 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 UBA1P22314 1058 aaKnown RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 POU1F1P28069 291 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 PDIA3P30101 505 aaKnown RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 SHMT1P34896 483 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 WNT5AP41221 380 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 CLDN20P56880 219 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 TAS2R38P59533 333 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 GALNT1Q10472 559 aaPredicted RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 NAE1Q13564 534 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 CUL4BQ13620 913 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 CAPRIN1Q14444 709 aaKnown RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 RFTN1Q14699 578 aaPredicted RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 KIR2DS5Q14953 304 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 E2F5Q15329 346 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 PUM3Q15397 648 aaKnown RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 DUOXA1Q1HG43 343 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 SGSM1Q2NKQ1 1148 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 KRTAP21-2Q3LI59 83 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 CTXN3Q4LDR2 81 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 C2CD6Q53TS8 623 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 FAM83BQ5T0W9 1011 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 DCST1Q5T197 706 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 SYCP2LQ5T4T6 812 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 CYP4A22Q5TCH4 519 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 SEL1L3Q68CR1 1132 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 C18orf63Q68DL7 685 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 DMKNQ6E0U4 476 aaPredicted RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 LIN54Q6MZP7 749 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 DENND1BQ6P3S1 775 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 C17orf99Q6UX52 265 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 PLXDC2Q6UX71 529 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 KSR2Q6VAB6 950 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 C11orf96Q7Z7L8 435 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 SRLQ86TD4 932 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms