RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 C1orf232A0A0U1RR37 186 aa17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 PIPSLA2A3N6 862 aa17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 TTLL8A6PVC2 850 aa17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 FADS2P1A8MWK0 482 aa17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 VPS4BO75351 444 aa17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 NDUFA10O95299 355 aa17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 FTLP02792 175 aaPredicted RBP17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 AMD1P17707 334 aa17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 CASP14P31944 242 aa17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 LEPRP48357 1165 aaKnown RBP17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 CD97P48960 835 aa17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 MAP7Q14244 749 aa17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 TXNRD3NBQ6F5E7 133 aa17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 TCTN3Q6NUS6 607 aa17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 PPP1R2P3Q6NXS1 205 aa17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 IRF2BP2Q7Z5L9 587 aa17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 LRRN4Q8WUT4 740 aa17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 C9orf72Q96LT7 481 aa17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 ERGIC2Q96RQ1 377 aa17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 POLR1EQ9GZS1 481 aaKnown RBP17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 KLC4Q9NSK0 619 aa17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 VPS18Q9P253 973 aa17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 PLEKHB1Q9UF11 243 aaPredicted RBP17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 LIMA1Q9UHB6 759 aaKnown RBP17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 CNOT6Q9ULM6 557 aaKnown RBP17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 VPS4AQ9UN37 437 aa17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 SPENQ96T58 3664 aaKnown RBP17.57■□□□□ 0.4
PDLIM4-202ENST00000379018 KIR2DS5A0A0G2JLQ3 304 aa17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 A0A0G2JNG1 304 aa17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 A6NCN8 305 aa17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 KIR2DS3K7RE56 304 aa17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 GRID2O43424 1007 aa17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 FZD6O60353 706 aa17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 SLC4A1P02730 911 aa17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 PDGFAP04085 211 aa17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 RARAP10276 462 aa17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 KRT81Q14533 505 aa17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 KIR2DS5Q14953 304 aa17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 ASIC2Q16515 512 aa17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 TDRD12Q587J7 1177 aaKnown RBP17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 FHL5Q5TD97 284 aa17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 ALS2CLQ60I27 953 aa17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 PLEKHG4BQ96PX9 1271 aa17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 SYT11Q9BT88 431 aa17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 OR2AG1Q9H205 316 aa17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 OGFRQ9NZT2 677 aa17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 SCHIP1Q9P0W5 487 aaPredicted RBP17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 RCOR3Q9P2K3 495 aaPredicted RBP17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 DNAJC16Q9Y2G8 782 aa17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 SCINQ9Y6U3 715 aa17.56■□□□□ 0.4
PDLIM4-202ENST00000379018 A1L4Q6 167 aa17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 LILRA5A6NI73 299 aa17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 LRRC53A6NM62 1247 aa17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 MFSD11O43934 449 aa17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 UBXN7O94888 489 aa17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 VIPP01282 170 aa17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 ANKRD34CP0C6C1 535 aa17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 GJC1P36383 396 aa17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 SSR1P43307 286 aaKnown RBP17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 PMS2P54278 862 aa17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 MMRN1Q13201 1228 aa17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 IHHQ14623 411 aa17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 CRTC2Q53ET0 693 aaPredicted RBP17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 FAM92BQ6ZTR7 304 aa17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 WDR24Q96S15 920 aa17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 TDRD1Q9BXT4 1180 aaKnown RBP17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 EPB41L1Q9H4G0 881 aa17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 FAM83DQ9H4H8 585 aa17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 HAUS4Q9H6D7 363 aa17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 PCDH18Q9HCL0 1135 aa17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 PKD2L2Q9NZM6 624 aa17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 ATXN10Q9UBB4 475 aa17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 SLC30A1Q9Y6M5 507 aa17.55■□□□□ 0.4
PDLIM4-202ENST00000379018 OR5K4A6NMS3 321 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 PDZK1P1A8MUH7 402 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 KIF1CO43896 1103 aaKnown RBP17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 CCNYL3P0C7X3 344 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 ATP1A3P13637 1013 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 ZNF8P17098 575 aaPredicted RBP17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 PCK1P35558 622 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 SPINT3P49223 89 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 UBE2IP63279 158 aaKnown RBP17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 CHAF1BQ13112 559 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 DNASE1L3Q13609 305 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 INSCQ1MX18 579 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 BOLA3Q53S33 107 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 HENMT1Q5T8I9 393 aaKnown RBP17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 IRGCQ6NXR0 463 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 TMEM26Q6ZUK4 368 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 ZNF571Q7Z3V5 609 aaPredicted RBP17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 NLRP8Q86W28 1048 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 CPT1CQ8TCG5 803 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 CT55Q8WUE5 264 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 RSC1A1Q92681 617 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 BTBD6Q96KE9 485 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 SPATA16Q9BXB7 569 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 TRIM55Q9BYV6 548 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 RMI1Q9H9A7 625 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 PCDH9Q9HC56 1237 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 RBM22Q9NW64 420 aaKnown RBP eCLIP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms