RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 C9orf57Q5W0N0 161 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 UGT3A1Q6NUS8 523 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 PLPPR4Q7Z2D5 763 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 NIM1KQ8IY84 436 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 ZNF555Q8NEP9 628 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 BEST2Q8NFU1 509 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 CNIH3Q8TBE1 160 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 AMBRA1Q9C0C7 1298 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 WDCPQ9H6R7 721 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 C8orf4Q9NR00 106 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.78■□□□□ 0.12
CKAP4-201ENST00000378026 PAK1IP1Q9NWT1 392 aaPredicted RBP15.78■□□□□ 0.12
CKAP4-201ENST00000378026 U3KQV3 271 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 A0A1W2PP18 115 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 G3V2T6 193 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 AP3B1O00203 1094 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 UPK1AO00322 258 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 UGT2B4P06133 528 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 DNAJB1P25685 340 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 SPESP1Q6UW49 350 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 TFAP2DQ7Z6R9 452 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 ITFG1Q8TB96 612 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 DACH2Q96NX9 599 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 TRIM54Q9BYV2 358 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 SDR39U1Q9NRG7 319 aaPredicted RBP15.78■□□□□ 0.12
CKAP4-201ENST00000378026 SLCO3A1Q9UIG8 710 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 INVSQ9Y283 1065 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 NCF1BA6NI72 391 aaPredicted RBP15.77■□□□□ 0.12
CKAP4-201ENST00000378026 NCF1CA8MVU1 366 aaPredicted RBP15.77■□□□□ 0.12
CKAP4-201ENST00000378026 DLGAP3O95886 979 aa15.77■□□□□ 0.12
CKAP4-201ENST00000378026 TGFB3P10600 412 aa15.77■□□□□ 0.12
CKAP4-201ENST00000378026 NCF1P14598 390 aaPredicted RBP15.77■□□□□ 0.12
CKAP4-201ENST00000378026 SCNN1AP37088 669 aa15.77■□□□□ 0.12
CKAP4-201ENST00000378026 HERVK_113P63132 956 aa15.77■□□□□ 0.12
CKAP4-201ENST00000378026 KCNAB2Q13303 367 aa15.77■□□□□ 0.12
CKAP4-201ENST00000378026 SELPLGQ14242 412 aa15.77■□□□□ 0.12
CKAP4-201ENST00000378026 PHYKPLQ8IUZ5 450 aa15.77■□□□□ 0.12
CKAP4-201ENST00000378026 APPL2Q8NEU8 664 aa15.77■□□□□ 0.12
CKAP4-201ENST00000378026 FIG4Q92562 907 aa15.77■□□□□ 0.12
CKAP4-201ENST00000378026 NT5C3BQ969T7 300 aa15.77■□□□□ 0.12
CKAP4-201ENST00000378026 MUL1Q969V5 352 aa15.77■□□□□ 0.12
CKAP4-201ENST00000378026 VAT1Q99536 393 aa15.77■□□□□ 0.12
CKAP4-201ENST00000378026 ERVK-6Q9BXR3 956 aa15.77■□□□□ 0.12
CKAP4-201ENST00000378026 GDAP2Q9NXN4 497 aa15.77■□□□□ 0.12
CKAP4-201ENST00000378026 HS6ST1O60243 411 aa15.77■□□□□ 0.11
CKAP4-201ENST00000378026 UMPSP11172 480 aa15.77■□□□□ 0.11
CKAP4-201ENST00000378026 POLD2P49005 469 aa15.77■□□□□ 0.11
CKAP4-201ENST00000378026 TSPY1Q01534 308 aa15.77■□□□□ 0.11
CKAP4-201ENST00000378026 FSCN1Q16658 493 aaKnown RBP15.77■□□□□ 0.11
CKAP4-201ENST00000378026 VASH1Q7L8A9 365 aaPredicted RBP15.77■□□□□ 0.11
CKAP4-201ENST00000378026 CRYBG2Q8N1P7 616 aa15.77■□□□□ 0.11
CKAP4-201ENST00000378026 MFSD4AQ8N468 514 aa15.77■□□□□ 0.11
CKAP4-201ENST00000378026 MTMR14Q8NCE2 650 aa15.77■□□□□ 0.11
CKAP4-201ENST00000378026 B3GALNT2Q8NCR0 500 aa15.77■□□□□ 0.11
CKAP4-201ENST00000378026 PSD4Q8NDX1 1056 aa15.77■□□□□ 0.11
CKAP4-201ENST00000378026 CHST13Q8NET6 341 aa15.77■□□□□ 0.11
CKAP4-201ENST00000378026 S100ZQ8WXG8 99 aa15.77■□□□□ 0.11
CKAP4-201ENST00000378026 HDAC2Q92769 488 aaKnown RBP15.77■□□□□ 0.11
CKAP4-201ENST00000378026 ESAMQ96AP7 390 aa15.77■□□□□ 0.11
CKAP4-201ENST00000378026 GLOD4Q9HC38 313 aa15.77■□□□□ 0.11
CKAP4-201ENST00000378026 KLHL3Q9UH77 587 aa15.77■□□□□ 0.11
CKAP4-201ENST00000378026 ZNF639Q9UID6 485 aa15.77■□□□□ 0.11
CKAP4-201ENST00000378026 HACL1Q9UJ83 578 aa15.77■□□□□ 0.11
CKAP4-201ENST00000378026 FBXW11Q9UKB1 542 aa15.77■□□□□ 0.11
CKAP4-201ENST00000378026 PMF1-BGLAPU3KQ54 211 aa15.77■□□□□ 0.11
CKAP4-201ENST00000378026 COL4A5P29400 1685 aa15.77■□□□□ 0.11
CKAP4-201ENST00000378026 ZNF99A8MXY4 864 aaPredicted RBP15.76■□□□□ 0.11
CKAP4-201ENST00000378026 SOAT2O75908 522 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 SEC24AO95486 1093 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 YWHAHQ04917 246 aaPredicted RBP15.76■□□□□ 0.11
CKAP4-201ENST00000378026 ITKQ08881 620 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 SEMA3BQ13214 749 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 ARL13BQ3SXY8 428 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 AKAP14Q86UN6 197 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 OSTM1Q86WC4 334 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 DTWD1Q8N5C7 304 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 ATPAF2Q8N5M1 289 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 GOLM1Q8NBJ4 401 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 LEMD2Q8NC56 503 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 AGBL3Q8NEM8 1001 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 BPIFB1Q8TDL5 484 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 FRS2Q8WU20 508 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 PTCD2Q8WV60 388 aaKnown RBP15.76■□□□□ 0.11
CKAP4-201ENST00000378026 EMID1Q96A84 441 aaPredicted RBP15.76■□□□□ 0.11
CKAP4-201ENST00000378026 ZBED3Q96IU2 234 aaPredicted RBP15.76■□□□□ 0.11
CKAP4-201ENST00000378026 UBXN10Q96LJ8 280 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 ACOX2Q99424 681 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 TRMOQ9BU70 441 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 DUSP16Q9BY84 665 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 PRDM8Q9NQV8 689 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 RBM22Q9NW64 420 aaKnown RBP eCLIP15.76■□□□□ 0.11
CKAP4-201ENST00000378026 NPR3P17342 541 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 PSMB9P28065 219 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 PRDX3P30048 256 aaKnown RBP15.76■□□□□ 0.11
CKAP4-201ENST00000378026 ARL1P40616 181 aaPredicted RBP15.76■□□□□ 0.11
CKAP4-201ENST00000378026 EMX1Q04741 257 aaPredicted RBP15.76■□□□□ 0.11
CKAP4-201ENST00000378026 CHRNB3Q05901 458 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 DGUOKQ16854 277 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 TTC23Q5W5X9 447 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 PAPD5Q8NDF8 572 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms