RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 ST14Q9Y5Y6 855 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 CCDC187A0A096LP49 1063 aa16.66■□□□□ 0.26
HMGN4-201ENST00000377575 A0A1W2PQM1 296 aa16.66■□□□□ 0.26
HMGN4-201ENST00000377575 TLX3O43711 291 aaPredicted RBP16.66■□□□□ 0.26
HMGN4-201ENST00000377575 KRT86O43790 486 aa16.66■□□□□ 0.26
HMGN4-201ENST00000377575 SLC25A14O95258 325 aaPredicted RBP16.66■□□□□ 0.26
HMGN4-201ENST00000377575 BPIP17213 487 aa16.66■□□□□ 0.26
HMGN4-201ENST00000377575 INHBCP55103 352 aa16.66■□□□□ 0.26
HMGN4-201ENST00000377575 PCBP4P57723 403 aaKnown RBP16.66■□□□□ 0.26
HMGN4-201ENST00000377575 ERVPABLB-1P60509 514 aa16.66■□□□□ 0.26
HMGN4-201ENST00000377575 EIF3IQ13347 325 aaKnown RBP16.66■□□□□ 0.26
HMGN4-201ENST00000377575 ANKRD20A2Q5SQ80 823 aa16.66■□□□□ 0.26
HMGN4-201ENST00000377575 ANKRD20A1Q5TYW2 823 aa16.66■□□□□ 0.26
HMGN4-201ENST00000377575 ANKRD20A3Q5VUR7 823 aa16.66■□□□□ 0.26
HMGN4-201ENST00000377575 AADACL2Q6P093 401 aa16.66■□□□□ 0.26
HMGN4-201ENST00000377575 IGF2-ASQ6U949 168 aa16.66■□□□□ 0.26
HMGN4-201ENST00000377575 ZNF438Q7Z4V0 828 aa16.66■□□□□ 0.26
HMGN4-201ENST00000377575 NAGSQ8N159 534 aa16.66■□□□□ 0.26
HMGN4-201ENST00000377575 ARL14Q8N4G2 192 aa16.66■□□□□ 0.26
HMGN4-201ENST00000377575 GLYATL1Q969I3 302 aa16.66■□□□□ 0.26
HMGN4-201ENST00000377575 LRRC45Q96CN5 670 aa16.66■□□□□ 0.26
HMGN4-201ENST00000377575 C10orf88Q9H8K7 445 aa16.66■□□□□ 0.26
HMGN4-201ENST00000377575 THSD1Q9NS62 852 aa16.66■□□□□ 0.26
HMGN4-201ENST00000377575 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.66■□□□□ 0.269e-6■□□□□ 10.7
HMGN4-201ENST00000377575 AAR2Q9Y312 384 aaKnown RBP16.66■□□□□ 0.26
HMGN4-201ENST00000377575 PLEKHM1Q9Y4G2 1056 aa16.66■□□□□ 0.26
HMGN4-201ENST00000377575 PCDHGA8Q9Y5G5 932 aa16.66■□□□□ 0.26
HMGN4-201ENST00000377575 CAPN6Q9Y6Q1 641 aa16.66■□□□□ 0.26
HMGN4-201ENST00000377575 A0A0U1RQJ8 604 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 AURKAO14965 403 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 CASC3O15234 703 aaKnown RBP16.65■□□□□ 0.26
HMGN4-201ENST00000377575 ARHGAP6O43182 974 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 GRID2O43424 1007 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 NUAK1O60285 661 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 SLC2A4P14672 509 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 RBMS1P29558 406 aaKnown RBP16.65■□□□□ 0.26
HMGN4-201ENST00000377575 CCKBRP32239 447 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 SPAM1P38567 509 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 EIF2S3P41091 472 aaKnown RBP16.65■□□□□ 0.26
HMGN4-201ENST00000377575 MLLT3P42568 568 aaPredicted RBP16.65■□□□□ 0.26
HMGN4-201ENST00000377575 CHRNA4P43681 627 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 NR1D2Q14995 579 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 MAP9Q49MG5 647 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 CHST15Q7LFX5 561 aaPredicted RBP16.65■□□□□ 0.26
HMGN4-201ENST00000377575 BLOC1S5Q8TDH9 187 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 UBE2Q2Q8WVN8 375 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 HES6Q96HZ4 224 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 SPATA13Q96N96 652 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 VPS35Q96QK1 796 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 FAM118BQ9BPY3 351 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 FICDQ9BVA6 458 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 OR2AG1Q9H205 316 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 EPB41L5Q9HCM4 733 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 TRIM39Q9HCM9 518 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 BPIFA1Q9NP55 256 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 ATXN10Q9UBB4 475 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 LHX6Q9UPM6 363 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 PKP3Q9Y446 797 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 ADGRG1Q9Y653 693 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 ITPR1Q14643 2758 aa16.65■□□□□ 0.26
HMGN4-201ENST00000377575 DDX3YO15523 660 aaKnown RBP16.64■□□□□ 0.25
HMGN4-201ENST00000377575 PPFIA2O75334 1257 aa16.64■□□□□ 0.25
HMGN4-201ENST00000377575 ACP5P13686 325 aa16.64■□□□□ 0.25
HMGN4-201ENST00000377575 ZNF8P17098 575 aaPredicted RBP16.64■□□□□ 0.25
HMGN4-201ENST00000377575 PSMB4P28070 264 aa16.64■□□□□ 0.25
HMGN4-201ENST00000377575 ABCG1P45844 678 aa16.64■□□□□ 0.25
HMGN4-201ENST00000377575 GPR3P46089 330 aa16.64■□□□□ 0.25
HMGN4-201ENST00000377575 CLPPQ16740 277 aaPredicted RBP16.64■□□□□ 0.25
HMGN4-201ENST00000377575 C19orf48Q6RUI8 117 aa16.64■□□□□ 0.25
HMGN4-201ENST00000377575 B3GNT8Q7Z7M8 397 aa16.64■□□□□ 0.25
HMGN4-201ENST00000377575 TTC30BQ8N4P2 665 aa16.64■□□□□ 0.25
HMGN4-201ENST00000377575 HNRNPLLQ8WVV9 542 aaKnown RBP16.64■□□□□ 0.25
HMGN4-201ENST00000377575 PATE1Q8WXA2 126 aa16.64■□□□□ 0.25
HMGN4-201ENST00000377575 FOXP3Q9BZS1 431 aa16.64■□□□□ 0.25
HMGN4-201ENST00000377575 STN1Q9H668 368 aaKnown RBP16.64■□□□□ 0.25
HMGN4-201ENST00000377575 GUCA1BQ9UMX6 200 aa16.64■□□□□ 0.25
HMGN4-201ENST00000377575 PRKAB1Q9Y478 270 aa16.64■□□□□ 0.25
HMGN4-201ENST00000377575 BPTFQ12830 3046 aa16.63■□□□□ 0.25
HMGN4-201ENST00000377575 VEGFDO43915 354 aa16.63■□□□□ 0.25
HMGN4-201ENST00000377575 CPNE6O95741 557 aa16.63■□□□□ 0.25
HMGN4-201ENST00000377575 ALDH4A1P30038 563 aa16.63■□□□□ 0.25
HMGN4-201ENST00000377575 FASLGP48023 281 aa16.63■□□□□ 0.25
HMGN4-201ENST00000377575 B4GALNT1Q00973 533 aa16.63■□□□□ 0.25
HMGN4-201ENST00000377575 KLF1Q13351 362 aaPredicted RBP16.63■□□□□ 0.25
HMGN4-201ENST00000377575 GTF2H3Q13889 308 aa16.63■□□□□ 0.25
HMGN4-201ENST00000377575 COL28A1Q2UY09 1125 aa16.63■□□□□ 0.25
HMGN4-201ENST00000377575 SEL1L2Q5TEA6 688 aa16.63■□□□□ 0.25
HMGN4-201ENST00000377575 FOXR1Q6PIV2 292 aa16.63■□□□□ 0.25
HMGN4-201ENST00000377575 ARHGEF18Q6ZSZ5 1173 aa16.63■□□□□ 0.25
HMGN4-201ENST00000377575 ADGRG6Q86SQ4 1221 aa16.63■□□□□ 0.25
HMGN4-201ENST00000377575 ZNF248Q8NDW4 579 aa16.63■□□□□ 0.25
HMGN4-201ENST00000377575 CCDC110Q8TBZ0 833 aa16.63■□□□□ 0.25
HMGN4-201ENST00000377575 DTX3LQ8TDB6 740 aa16.63■□□□□ 0.25
HMGN4-201ENST00000377575 GORASP1Q9BQQ3 440 aa16.63■□□□□ 0.25
HMGN4-201ENST00000377575 ZCCHC2Q9C0B9 1178 aaKnown RBP16.63■□□□□ 0.25
HMGN4-201ENST00000377575 ARFGAP3Q9NP61 516 aa16.63■□□□□ 0.25
HMGN4-201ENST00000377575 ASCL3Q9NQ33 180 aa16.63■□□□□ 0.25
HMGN4-201ENST00000377575 IL17CQ9P0M4 197 aa16.63■□□□□ 0.25
HMGN4-201ENST00000377575 ATXN7L1Q9ULK2 861 aaPredicted RBP16.63■□□□□ 0.25
HMGN4-201ENST00000377575 KCNK6Q9Y257 313 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms