RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 GMPRP36959 345 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 ARCN1P48444 511 aaKnown RBP12.09□□□□□ -0.47
C9orf3-203ENST00000375315 SLC7A2P52569 658 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 ADARB1P78563 741 aaKnown RBP12.09□□□□□ -0.47
C9orf3-203ENST00000375315 CDK10Q15131 360 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 TRIM60Q495X7 471 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 SCN4BQ8IWT1 228 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 CMTR2Q8IYT2 770 aaKnown RBP12.09□□□□□ -0.47
C9orf3-203ENST00000375315 PLD6Q8N2A8 252 aaKnown RBP12.09□□□□□ -0.47
C9orf3-203ENST00000375315 ANKRD52Q8NB46 1076 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 FAM110BQ8TC76 370 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 LRRC40Q9H9A6 602 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 ZDHHC2Q9UIJ5 367 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 LRFN2Q9ULH4 789 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 PSAT1Q9Y617 370 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 TTC3P53804 2025 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 SAGE2PA6NJ88 616 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 SNAP29O95721 258 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 LTFP02788 710 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 BDNFP23560 247 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 MIPP30301 263 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 GRK3P35626 688 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 GRIA4P48058 902 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 ADIGQ0VDE8 80 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 FASTKQ14296 549 aaKnown RBP12.09□□□□□ -0.47
C9orf3-203ENST00000375315 PUS10Q3MIT2 529 aaKnown RBP12.09□□□□□ -0.47
C9orf3-203ENST00000375315 AGKQ53H12 422 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 GRTP1Q5TC63 336 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 LIPMQ5VYY2 423 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 FAM45BPQ6NSW5 357 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 LAYNQ6UX15 382 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 NT5DC4Q86YG4 428 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 FAM45AQ8TCE6 357 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 LINC01599Q8WXQ3 324 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 HDAC10Q969S8 669 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 SOX17Q9H6I2 414 aaPredicted RBP12.09□□□□□ -0.47
C9orf3-203ENST00000375315 HPS4Q9NQG7 708 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 TMPRSS4Q9NRS4 437 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.09□□□□□ -0.47
C9orf3-203ENST00000375315 KCNN3Q9UGI6 736 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 PCDHGA8Q9Y5G5 932 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 SIP14410 1827 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 ZNF236Q9UL36 1845 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 BCLAF3A2AJT9 711 aaKnown RBP12.09□□□□□ -0.47
C9orf3-203ENST00000375315 B8ZZF3 427 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 TMCC2O75069 709 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 GPC4O75487 556 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 KCNK2O95069 426 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 PTTG1O95997 202 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 MPOP05164 745 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 LRPAP1P30533 357 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 GRIK1P39086 918 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 KRR1Q13601 381 aaKnown RBP12.09□□□□□ -0.47
C9orf3-203ENST00000375315 SQLEQ14534 574 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 CTF1Q16619 201 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 ZNF181Q2M3W8 571 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 TCTN1Q2MV58 587 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 PIGZQ86VD9 579 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 LYSMD2Q8IV50 215 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 AFAP1L2Q8N4X5 818 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 DCLK2Q8N568 766 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 RHOXF1Q8NHV9 184 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 PHF10Q8WUB8 498 aaKnown RBP12.09□□□□□ -0.47
C9orf3-203ENST00000375315 EDEM1Q92611 657 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 GLMNQ92990 594 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 CPNE1Q99829 537 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 SLC25A23Q9BV35 468 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 FTHL17Q9BXU8 183 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 IL22Q9GZX6 179 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 C12orf10Q9HB07 376 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 USP18Q9UMW8 372 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 VWA7Q9Y334 891 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 UGT2A1Q9Y4X1 527 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 MAU2Q9Y6X3 613 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 A0A096LPK6 155 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 CENPXA8MT69 81 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 F5H423 210 aaPredicted RBP12.08□□□□□ -0.48
C9orf3-203ENST00000375315 TRUB2O95900 331 aaKnown RBP12.08□□□□□ -0.48
C9orf3-203ENST00000375315 SNRPB2P08579 225 aaKnown RBP12.08□□□□□ -0.48
C9orf3-203ENST00000375315 SPRP35270 261 aaPredicted RBP12.08□□□□□ -0.48
C9orf3-203ENST00000375315 EIF2DP41214 584 aaKnown RBP12.08□□□□□ -0.48
C9orf3-203ENST00000375315 PITX1P78337 314 aaPredicted RBP12.08□□□□□ -0.48
C9orf3-203ENST00000375315 INCA1Q0VD86 236 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 SPOUT1Q5T280 376 aaKnown RBP12.08□□□□□ -0.48
C9orf3-203ENST00000375315 KIAA1841Q6NSI8 718 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 TRNP1Q6NT89 227 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 LCLAT1Q6UWP7 414 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 MUL1Q969V5 352 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 MUS81Q96NY9 551 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 LRRC4Q9HBW1 653 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 FAM25AB3EWG3 89 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 FAM25CB3EWG5 89 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 FAM25GB3EWG6 89 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 XYLBO75191 536 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 SOAT2O75908 522 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 TSPAN9O75954 239 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 SELPP16109 830 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 DDX5P17844 614 aaKnown RBP12.08□□□□□ -0.48
C9orf3-203ENST00000375315 CRHBPP24387 322 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 CBX2Q14781 532 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms