RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 P2RY11Q96G91 374 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 HHIPL1Q96JK4 782 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 MAGEB5Q9BZ81 275 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 RHOJQ9H4E5 214 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 RPRD1BQ9NQG5 326 aaKnown RBP12.85□□□□□ -0.35
PRPF4-201ENST00000374198 BFARQ9NZS9 450 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 KIAA1257Q9ULG3 409 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 STAP1Q9ULZ2 295 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 MAGED2Q9UNF1 606 aaPredicted RBP12.85□□□□□ -0.35
PRPF4-201ENST00000374198 UBXN8O00124 270 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 DPYSL4O14531 572 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 APOA1P02647 267 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 EDN1P05305 212 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 ISL1P61371 349 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 TFAMQ00059 246 aaKnown RBP12.85□□□□□ -0.35
PRPF4-201ENST00000374198 LIPEQ05469 1076 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 FOXM1Q08050 763 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 ZNF460Q14592 562 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 DPYSL2Q16555 572 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 ERAP2Q6P179 960 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 CYHR1Q6ZMK1 362 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 ZNF438Q7Z4V0 828 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 CCDC185Q8N715 623 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 ZHX1-C8orf76Q96EF9 292 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 CSPG4P5Q96PW8 444 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 TWNKQ96RR1 684 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 GAD1Q99259 594 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 GDF15Q99988 308 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 MRM3Q9HC36 420 aaKnown RBP12.85□□□□□ -0.35
PRPF4-201ENST00000374198 WDR6Q9NNW5 1121 aaKnown RBP12.85□□□□□ -0.35
PRPF4-201ENST00000374198 ATP13A2Q9NQ11 1180 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 WDR70Q9NW82 654 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 FBXL12Q9NXK8 326 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 PGK1P00558 417 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 PSAPP07602 524 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 ALOX12P18054 663 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 CYP3A5P20815 502 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 BDNFP23560 247 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 SDC4P31431 198 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 TGFBR1P36897 503 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 ETV3P41162 512 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 MAP2K4P45985 399 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 DEFA1P59665 94 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 DEFA3P59666 94 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 IFRD2Q12894 506 aaPredicted RBP12.84□□□□□ -0.35
PRPF4-201ENST00000374198 EPS8Q12929 822 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 PCSK7Q16549 785 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 RABL3Q5HYI8 236 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 SYT6Q5T7P8 510 aaPredicted RBP12.84□□□□□ -0.35
PRPF4-201ENST00000374198 RPS27LQ71UM5 84 aaKnown RBP12.84□□□□□ -0.35
PRPF4-201ENST00000374198 SLC26A9Q7LBE3 791 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 SYTL1Q8IYJ3 562 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 NLGN4XQ8N0W4 816 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 RPL3LQ92901 407 aaKnown RBP12.84□□□□□ -0.35
PRPF4-201ENST00000374198 HSFY1Q96LI6 401 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 ASB2Q96Q27 587 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 MRPL57Q9BQC6 102 aaKnown RBP12.84□□□□□ -0.35
PRPF4-201ENST00000374198 TTYH2Q9BSA4 534 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 IDI2Q9BXS1 227 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 TRIM54Q9BYV2 358 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 SLC7A5P2Q9GIP4 190 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 SEPT10Q9P0V9 454 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 FAM198AQ9UFP1 575 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 NUDT5Q9UKK9 219 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 WBP11Q9Y2W2 641 aaKnown RBP12.84□□□□□ -0.35
PRPF4-201ENST00000374198 ZFC3H1O60293 1989 aaKnown RBP12.84□□□□□ -0.35
PRPF4-201ENST00000374198 A0A0G2JMP0 313 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 hCG_2039718K7EN88 272 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 AOC2O75106 756 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 CCDC159P0C7I6 412 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 HOXD10P28358 340 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 ZNF45Q02386 682 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 GALNT1Q10472 559 aaPredicted RBP12.84□□□□□ -0.35
PRPF4-201ENST00000374198 DGCR6Q14129 220 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 TYSND1Q2T9J0 566 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 Q5BKY6 102 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 SMYD5Q6GMV2 418 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 CYP20A1Q6UW02 462 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 ZDHHC13Q8IUH4 622 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 OR5H6Q8NGV6 325 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 DNAJB14Q8TBM8 379 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 MCOLN3Q8TDD5 553 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 REXO4Q9GZR2 422 aaKnown RBP12.84□□□□□ -0.35
PRPF4-201ENST00000374198 SMURF2Q9HAU4 748 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 TM9SF3Q9HD45 589 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 HMGXB4Q9UGU5 601 aa12.84□□□□□ -0.35
PRPF4-201ENST00000374198 MYO18AQ92614 2054 aaKnown RBP12.84□□□□□ -0.35
PRPF4-201ENST00000374198 A8MV72 311 aaPredicted RBP12.83□□□□□ -0.36
PRPF4-201ENST00000374198 C9JVG2 144 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 NFIBO00712 420 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 MTRF1O75570 445 aaKnown RBP12.83□□□□□ -0.36
PRPF4-201ENST00000374198 CD4P01730 458 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 CTRB1P17538 263 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 CD6P30203 668 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 CYP2C18P33260 490 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 GGT5P36269 586 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 HTR2BP41595 481 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 ST13P50502 369 aaKnown RBP12.83□□□□□ -0.36
PRPF4-201ENST00000374198 TRAF3Q13114 568 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 FAM219BQ5XKK7 198 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms