RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 ZDHHC1Q8WTX9 485 aa20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 GLYATL1Q969I3 302 aa20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 VPS35Q96QK1 796 aa20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 SPATA16Q9BXB7 569 aa20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 CARD9Q9H257 536 aa20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 ARNT2Q9HBZ2 717 aa20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 TRIM39Q9HCM9 518 aa20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 IL26Q9NPH9 171 aa20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 ATXN10Q9UBB4 475 aa20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 GPSM3Q9Y4H4 160 aa20.34■□□□□ 0.85
SMNDC1-201ENST00000369592 A6NCN8 305 aa20.33■□□□□ 0.85
SMNDC1-201ENST00000369592 PRR19A6NJB7 356 aa20.33■□□□□ 0.85
SMNDC1-201ENST00000369592 GAPDHSO14556 408 aaPredicted RBP20.33■□□□□ 0.85
SMNDC1-201ENST00000369592 LSSP48449 732 aa20.33■□□□□ 0.85
SMNDC1-201ENST00000369592 MAZP56270 477 aaKnown RBP20.33■□□□□ 0.85
SMNDC1-201ENST00000369592 ZNF569Q5MCW4 686 aa20.33■□□□□ 0.85
SMNDC1-201ENST00000369592 MEI1Q5TIA1 1274 aa20.33■□□□□ 0.85
SMNDC1-201ENST00000369592 KCTD11Q693B1 232 aa20.33■□□□□ 0.85
SMNDC1-201ENST00000369592 SLC30A9Q6PML9 568 aa20.33■□□□□ 0.85
SMNDC1-201ENST00000369592 IGF2-ASQ6U949 168 aa20.33■□□□□ 0.85
SMNDC1-201ENST00000369592 MARK2Q7KZI7 788 aaKnown RBP20.33■□□□□ 0.85
SMNDC1-201ENST00000369592 SPRED1Q7Z699 444 aa20.33■□□□□ 0.85
SMNDC1-201ENST00000369592 ADGRG6Q86SQ4 1221 aa20.33■□□□□ 0.85
SMNDC1-201ENST00000369592 GALNT13Q8IUC8 556 aa20.33■□□□□ 0.85
SMNDC1-201ENST00000369592 ARL14Q8N4G2 192 aa20.33■□□□□ 0.85
SMNDC1-201ENST00000369592 PATE1Q8WXA2 126 aa20.33■□□□□ 0.85
SMNDC1-201ENST00000369592 RTP4Q96DX8 246 aa20.33■□□□□ 0.85
SMNDC1-201ENST00000369592 PRR11Q96HE9 360 aaPredicted RBP20.33■□□□□ 0.85
SMNDC1-201ENST00000369592 LRRN3Q9H3W5 708 aa20.33■□□□□ 0.85
SMNDC1-201ENST00000369592 SUDS3Q9H7L9 328 aaPredicted RBP20.33■□□□□ 0.85
SMNDC1-201ENST00000369592 LRIT1Q9P2V4 623 aa20.33■□□□□ 0.85
SMNDC1-201ENST00000369592 RAXQ9Y2V3 346 aa20.33■□□□□ 0.85
SMNDC1-201ENST00000369592 FLNBO75369 2602 aaKnown RBP20.33■□□□□ 0.84
SMNDC1-201ENST00000369592 ADAMTS20P59510 1910 aa20.32■□□□□ 0.84
SMNDC1-201ENST00000369592 GPR89AB7ZAQ6 455 aa20.32■□□□□ 0.84
SMNDC1-201ENST00000369592 B4GAT1O43505 415 aa20.32■□□□□ 0.84
SMNDC1-201ENST00000369592 TLX3O43711 291 aaPredicted RBP20.32■□□□□ 0.84
SMNDC1-201ENST00000369592 BRINP1O60477 761 aa20.32■□□□□ 0.84
SMNDC1-201ENST00000369592 ECEL1O95672 775 aa20.32■□□□□ 0.84
SMNDC1-201ENST00000369592 EML2O95834 649 aa20.32■□□□□ 0.84
SMNDC1-201ENST00000369592 GPR89BP0CG08 455 aa20.32■□□□□ 0.84
SMNDC1-201ENST00000369592 ZNF8P17098 575 aaPredicted RBP20.32■□□□□ 0.84
SMNDC1-201ENST00000369592 ACTR1BP42025 376 aa20.32■□□□□ 0.84
SMNDC1-201ENST00000369592 CLCNKAP51800 687 aa20.32■□□□□ 0.84
SMNDC1-201ENST00000369592 ACTR1AP61163 376 aa20.32■□□□□ 0.84
SMNDC1-201ENST00000369592 OLIG2Q13516 323 aa20.32■□□□□ 0.84
SMNDC1-201ENST00000369592 KHDC1Q4VXA5 237 aaKnown RBP20.32■□□□□ 0.84
SMNDC1-201ENST00000369592 CCNJLQ8IV13 435 aa20.32■□□□□ 0.84
SMNDC1-201ENST00000369592 FERMT1Q9BQL6 677 aa20.32■□□□□ 0.84
SMNDC1-201ENST00000369592 FICDQ9BVA6 458 aa20.32■□□□□ 0.84
SMNDC1-201ENST00000369592 BPIFA1Q9NP55 256 aa20.32■□□□□ 0.84
SMNDC1-201ENST00000369592 AAR2Q9Y312 384 aaKnown RBP20.32■□□□□ 0.84
SMNDC1-201ENST00000369592 BPTFQ12830 3046 aa20.32■□□□□ 0.84
SMNDC1-201ENST00000369592 PTPRQQ9UMZ3 2332 aa20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 A0A087WV48 116 aa20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 GOLGA6L9A6NEM1 432 aa20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 D6RAR5 112 aa20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 USP12O75317 370 aa20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 SLC25A14O95258 325 aaPredicted RBP20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 ASMTLO95671 621 aa20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 CA5AP35218 305 aa20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 GDF10P55107 478 aa20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 ZFP36L1Q07352 338 aaKnown RBP20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 PEX6Q13608 980 aa20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 SPIDRQ14159 915 aa20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 OASLQ15646 514 aaKnown RBP20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 COL28A1Q2UY09 1125 aa20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 ATP13A5Q4VNC0 1218 aa20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 ZNF648Q5T619 568 aaPredicted RBP20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 ZDHHC20Q5W0Z9 365 aa20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 B3GNT8Q7Z7M8 397 aa20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 SNIP1Q8TAD8 396 aaKnown RBP20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 ATXN7L3BQ96GX2 97 aa20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 POLR1BQ9H9Y6 1135 aa20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 ARFGAP3Q9NP61 516 aa20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 ASCL3Q9NQ33 180 aa20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 PRKAB1Q9Y478 270 aa20.31■□□□□ 0.84
SMNDC1-201ENST00000369592 PPM1DO15297 605 aa20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 GRID2O43424 1007 aa20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 PPFIA2O75334 1257 aa20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 STK10O94804 968 aaKnown RBP20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 METTL18O95568 372 aa20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 SLC4A1P02730 911 aa20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 RPLP0P05388 317 aaKnown RBP20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 CCDC175P0C221 793 aa20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 CCKBRP32239 447 aa20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 FASLGP48023 281 aa20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 SQSTM1Q13501 440 aa20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 PARP6Q2NL67 630 aa20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 TMPRSS9Q7Z410 1059 aa20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 GLT6D1Q7Z4J2 308 aa20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 SLC13A5Q86YT5 568 aaPredicted RBP20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 ZNF547Q8IVP9 402 aa20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 SFRP1Q8N474 314 aa20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 FAM71DQ8N9W8 422 aa20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 BLOC1S5Q8TDH9 187 aa20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 LIN37Q96GY3 246 aaPredicted RBP20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 PPP1R2P1Q96PQ5 205 aa20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 C19orf43Q9BQ61 176 aa20.3■□□□□ 0.84
SMNDC1-201ENST00000369592 FSD1LQ9BXM9 530 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms