RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 TMA16Q96EY4 203 aaKnown RBP9.9□□□□□ -0.83
SIN3A-201ENST00000360439 CACNG4Q9UBN1 327 aa9.9□□□□□ -0.83
SIN3A-201ENST00000360439 STYXL1Q9Y6J8 313 aa9.9□□□□□ -0.83
SIN3A-201ENST00000360439 MYH10P35580 1976 aa9.9□□□□□ -0.83
SIN3A-201ENST00000360439 C3orf70A6NLC5 250 aaPredicted RBP9.89□□□□□ -0.83
SIN3A-201ENST00000360439 CBX4O00257 560 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 FPGTO14772 594 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 CLASP2O75122 1294 aaKnown RBP9.89□□□□□ -0.83
SIN3A-201ENST00000360439 RHOCP08134 193 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 ABCB1P08183 1280 aaPredicted RBP9.89□□□□□ -0.83
SIN3A-201ENST00000360439 IL10P22301 178 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 PRKAA1Q13131 559 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 DPYSQ14117 519 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 PPP1R3AQ16821 1122 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 ZNF362Q5T0B9 420 aaPredicted RBP9.89□□□□□ -0.83
SIN3A-201ENST00000360439 ZNF852Q6ZMS4 543 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 SSX9Q7RTT3 188 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 PLPP6Q8IY26 295 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 DCAKDQ8WVC6 231 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 PCYT2Q99447 389 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 PFDN5Q99471 154 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 TBCDQ9BTW9 1192 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 OLA1Q9NTK5 396 aaKnown RBP9.89□□□□□ -0.83
SIN3A-201ENST00000360439 GNPTGQ9UJJ9 305 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.89□□□□□ -0.831e-6■■■■■ 26.9
SIN3A-201ENST00000360439 COL5A3P25940 1745 aaPredicted RBP9.89□□□□□ -0.83
SIN3A-201ENST00000360439 A0A087WXM4 84 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 ERI2A8K979 691 aaKnown RBP9.89□□□□□ -0.83
SIN3A-201ENST00000360439 NRP1O14786 923 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 TYROBPO43914 113 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 PDE9AO76083 593 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 JUNDP17535 347 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 SMARCB1Q12824 385 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 BMPR2Q13873 1038 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 DSG2Q14126 1118 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 ARHGEF7Q14155 803 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 STARD3Q14849 445 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 POLD3Q15054 466 aaPredicted RBP9.89□□□□□ -0.83
SIN3A-201ENST00000360439 KLHL17Q6TDP4 642 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 XYLT1Q86Y38 959 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 SLC5A11Q8WWX8 675 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 MRPL45Q9BRJ2 306 aaKnown RBP9.89□□□□□ -0.83
SIN3A-201ENST00000360439 C1orf21Q9H246 121 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 IL23AQ9NPF7 189 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 PAQR5Q9NXK6 330 aaPredicted RBP9.89□□□□□ -0.83
SIN3A-201ENST00000360439 ARMCX1Q9P291 453 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 AP4B1Q9Y6B7 739 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 E2F8A0AVK6 867 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 E5RJQ4 531 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 PIGNO95427 931 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 IVDP26440 423 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 HLA-FP30511 346 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 L1CAMP32004 1257 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 NPY2RP49146 381 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 ABCE1P61221 599 aaKnown RBP9.89□□□□□ -0.83
SIN3A-201ENST00000360439 LSM3P62310 102 aaKnown RBP9.89□□□□□ -0.83
SIN3A-201ENST00000360439 TARBP2Q15633 366 aaKnown RBP9.89□□□□□ -0.83
SIN3A-201ENST00000360439 METTL11BQ5VVY1 283 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 TFAP2DQ7Z6R9 452 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 DEFB107AQ8IZN7 70 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 DEFB106AQ8N104 65 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 PCYOX1LQ8NBM8 494 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 JPH3Q8WXH2 748 aaPredicted RBP9.89□□□□□ -0.83
SIN3A-201ENST00000360439 MAP6Q96JE9 813 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 BTBD2Q9BX70 525 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 DERAQ9Y315 318 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 TRAV6A0A075B6T7 132 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 AIM2O14862 343 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 STX7O15400 261 aaKnown RBP9.89□□□□□ -0.83
SIN3A-201ENST00000360439 AKAP10O43572 662 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 APOL3O95236 402 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 LTFP02788 710 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 SLC18A2Q05940 514 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 GALNT3Q14435 633 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 FASTKD3Q14CZ7 662 aaKnown RBP9.89□□□□□ -0.83
SIN3A-201ENST00000360439 SLC10A6Q3KNW5 377 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 C1orf220Q5T0J3 134 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 PDZK1Q5T2W1 519 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 ZNF598Q86UK7 904 aaKnown RBP9.89□□□□□ -0.83
SIN3A-201ENST00000360439 PIGZQ86VD9 579 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 TOP6BLQ8N6T0 577 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 SPPL2BQ8TCT7 592 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 SERPINB11Q96P15 392 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 PSD2Q9BQI7 771 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 TCF7L2Q9NQB0 619 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 EHD3Q9NZN3 535 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 SLC25A13Q9UJS0 675 aa9.89□□□□□ -0.83
SIN3A-201ENST00000360439 A0A0A0MRY4 1105 aa9.88□□□□□ -0.83
SIN3A-201ENST00000360439 KRBA1A5PL33 1030 aa9.88□□□□□ -0.83
SIN3A-201ENST00000360439 VNN1O95497 513 aa9.88□□□□□ -0.83
SIN3A-201ENST00000360439 ACADMP11310 421 aa9.88□□□□□ -0.83
SIN3A-201ENST00000360439 CDH5P33151 784 aaPredicted RBP9.88□□□□□ -0.83
SIN3A-201ENST00000360439 HSD17B2P37059 387 aa9.88□□□□□ -0.83
SIN3A-201ENST00000360439 USP10Q14694 798 aaKnown RBP9.88□□□□□ -0.83
SIN3A-201ENST00000360439 KCTD19Q17RG1 926 aaPredicted RBP9.88□□□□□ -0.83
SIN3A-201ENST00000360439 FAM214AQ32MH5 1076 aa9.88□□□□□ -0.83
SIN3A-201ENST00000360439 FAM209BQ5JX69 171 aa9.88□□□□□ -0.83
SIN3A-201ENST00000360439 VARS2Q5ST30 1063 aaKnown RBP9.88□□□□□ -0.83
SIN3A-201ENST00000360439 FAXCQ5TGI0 409 aa9.88□□□□□ -0.83
SIN3A-201ENST00000360439 DCDC5Q6ZRR9 648 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms