RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 CLIC3O95833 236 aa10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 LINC00032P0C843 101 aa10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ODC1P11926 461 aa10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ZNF182P17025 639 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 RPL9P32969 192 aaKnown RBP10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ETFBP38117 255 aa10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ERVK-8P63133 956 aa10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ATP1A4Q13733 1029 aa10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ZC3H7AQ8IWR0 971 aaKnown RBP10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 CLEC4FQ8N1N0 589 aa10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 SVOPLQ8N434 492 aa10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 DPP10Q8N608 796 aa10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 GIPC2Q8TF65 315 aa10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 MYLPFQ96A32 169 aa10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ZNF599Q96NL3 588 aa10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ATOH8Q96SQ7 321 aa10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 DERL2Q9GZP9 239 aa10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 KATNBL1Q9H079 304 aa10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 NT5MQ9NPB1 228 aa10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 POLR3BQ9NW08 1133 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 RNF112Q9ULX5 631 aa10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 AP3M1Q9Y2T2 418 aa10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 PLXNB2O15031 1838 aa10.06□□□□□ -0.8
TRAPPC6B-202ENST00000347691 SUPT3HB4E1H0 165 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 CLDN25C9JDP6 229 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 E9PAM4 449 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 DYNC1LI2O43237 492 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 SLC4A1P02730 911 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 TFPTP0C1Z6 253 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 CD86P42081 329 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 KCNC1P48547 511 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 RAD51Q06609 339 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 PRKG2Q13237 762 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 PLCL1Q15111 1095 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 GALNT18Q6P9A2 607 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 TFAP2DQ7Z6R9 452 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 UMODL1-AS1Q8N2C9 162 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 SLC15A4Q8N697 577 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 SNX19Q92543 992 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ZNF419Q96HQ0 510 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 C1orf74Q96LT6 269 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ACBD6Q9BR61 282 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 C1QTNF3Q9BXJ4 246 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ABHD16BQ9H3Z7 469 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 PCDHGA11Q9Y5H2 935 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 NYNRINQ9P2P1 1898 aaKnown RBP10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 C1orf232A0A0U1RR37 186 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 CD3EAPO15446 510 aaKnown RBP10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 FGF1P05230 155 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 THP07101 528 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ANXA6P08133 673 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 SMPD1P17405 629 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 HLA-DPA1P20036 260 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 CD247P20963 164 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 MATN1P21941 496 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 BTG3Q14201 252 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 RABL3Q5HYI8 236 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 EGFLAMQ63HQ2 1017 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 GLYATQ6IB77 296 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ZDHHC13Q8IUH4 622 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 RIMKLAQ8IXN7 391 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 CHCHD4Q8N4Q1 142 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 DNAJB3Q8WWF6 145 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 MUS81Q96NY9 551 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 SERPINB11Q96P15 392 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 SEPHS2Q99611 448 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 AARSD1Q9BTE6 412 aaKnown RBP10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 TUBB1Q9H4B7 451 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 NANOGQ9H9S0 305 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 SP110Q9HB58 689 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 RPP40O75818 363 aaKnown RBP10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 F2P00734 622 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 FUCA1P04066 466 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 EIF2S1P05198 315 aaKnown RBP10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 RPS17P08708 135 aaKnown RBP10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 CRHBPP24387 322 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 CCR3P51677 355 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 BFSP2Q13515 415 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 NKAPQ8N5F7 415 aaKnown RBP10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 TMCO5AQ8N6Q1 288 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ARRDC4Q8NCT1 418 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 OR56A4Q8NGH8 313 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ITFG1Q8TB96 612 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 UPF1Q92900 1129 aaKnown RBP eCLIP10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 FEM1AQ9BSK4 669 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 NAA50Q9GZZ1 169 aaKnown RBP10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ADNPQ9H2P0 1102 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 SPON1Q9HCB6 807 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 CATSPERZQ9NTU4 200 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 TAS2R13Q9NYV9 303 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 BTRCQ9Y297 605 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 VPS9D1Q9Y2B5 631 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 CRYL1Q9Y2S2 319 aa10.05□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ANKRD36A6QL64 1941 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 LCHNA4D1U4 455 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 PFDN6O15212 129 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 SIX3O95343 332 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 ALPLP05186 524 aa10.04□□□□□ -0.8
TRAPPC6B-202ENST00000347691 MTHFD2P13995 350 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms