RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 FSHRP23945 695 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 NSFP46459 744 aaKnown RBP5.57□□□□□ -1.52
CSDE1-202ENST00000339438 CCNA1P78396 465 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 GPR50Q13585 617 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 PPP1R3AQ16821 1122 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 ZNF181Q2M3W8 571 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 PARP15Q460N3 678 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 GK5Q6ZS86 529 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 SV2AQ7L0J3 742 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 R3HCC1LQ7Z5L2 792 aaKnown RBP5.57□□□□□ -1.52
CSDE1-202ENST00000339438 ZBTB33Q86T24 672 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 WDR49Q8IV35 697 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 CTAGE3PQ8IX95 158 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 C4orf19Q8IY42 314 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 METTL4Q8N3J2 472 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 XXYLT1Q8NBI6 393 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 SLC2A14Q8TDB8 520 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 TRAPPC12Q8WVT3 735 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 ELMO2Q96JJ3 720 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 BCL7BQ9BQE9 202 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 KCNN2Q9H2S1 579 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 EPS8L2Q9H6S3 715 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 MRPL47Q9HD33 250 aaKnown RBP5.57□□□□□ -1.52
CSDE1-202ENST00000339438 TRMT13Q9NUP7 481 aaKnown RBP5.57□□□□□ -1.52
CSDE1-202ENST00000339438 SMPD3Q9NY59 655 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-202ENST00000339438 DCDC2Q9UHG0 476 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 CFL2Q9Y281 166 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 PCDHA11Q9Y5I1 949 aa5.57□□□□□ -1.52
CSDE1-202ENST00000339438 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 H3BUI4 141 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 PRSS23O95084 383 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 VNN1O95497 513 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 TCF3P15923 654 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 CNTFP26441 200 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 ZNF132P52740 706 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 DYNLT1P63172 113 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 PIGFQ07326 219 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 IKZF1Q13422 519 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 MRPL58Q14197 206 aaKnown RBP5.56□□□□□ -1.52
CSDE1-202ENST00000339438 SHHQ15465 462 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 MAPK11Q15759 364 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 KIZQ2M2Z5 673 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 FBXO47Q5MNV8 452 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 FAM45BPQ6NSW5 357 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 NPNTQ6UXI9 565 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 CYHR1Q6ZMK1 362 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 LIX1LQ8IVB5 337 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 FBXL13Q8NEE6 735 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 FAM45AQ8TCE6 357 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 URGCPQ8TCY9 931 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 GIMAP5Q96F15 307 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 TMEM80Q96HE8 168 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 EBNA1BP2Q99848 306 aaKnown RBP5.56□□□□□ -1.52
CSDE1-202ENST00000339438 SDCBP2Q9H190 292 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 FZD8Q9H461 694 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 XPNPEP3Q9NQH7 507 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 ACSS2Q9NR19 701 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 EIF3KQ9UBQ5 218 aaKnown RBP5.56□□□□□ -1.52
CSDE1-202ENST00000339438 FBXO10Q9UK96 956 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 KMT2BQ9UMN6 2715 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-202ENST00000339438 KPNA6O60684 536 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 CCNKO75909 580 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 SLITRK5O94991 958 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 TXNP10599 105 aaKnown RBP5.56□□□□□ -1.52
CSDE1-202ENST00000339438 MAPTP10636 758 aaKnown RBP5.56□□□□□ -1.52
CSDE1-202ENST00000339438 WEE1P30291 646 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 SERPINB1P30740 379 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 ARL1P40616 181 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-202ENST00000339438 SERPINB9P50453 376 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 BEX3Q00994 111 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 TRPC3Q13507 836 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 TTLL4Q14679 1199 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 NOMO1Q15155 1222 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 SKIV2LQ15477 1246 aaKnown RBP5.56□□□□□ -1.52
CSDE1-202ENST00000339438 SNRNP35Q16560 246 aaKnown RBP5.56□□□□□ -1.52
CSDE1-202ENST00000339438 ANO4Q32M45 955 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 WDR44Q5JSH3 913 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 BROXQ5VW32 411 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 REP15Q6BDI9 236 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 DCUN1D2Q6PH85 259 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 PADI6Q6TGC4 694 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 CATSPER4Q7RTX7 472 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 BMP8AQ7Z5Y6 402 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 CDR2LQ86X02 465 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-202ENST00000339438 DCLK2Q8N568 766 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 NAT16Q8N8M0 369 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 ARRDC4Q8NCT1 418 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 OR10Z1Q8NGY1 313 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 ARNTL2Q8WYA1 636 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 PMEPA1Q969W9 287 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 TMEM143Q96AN5 459 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 MFSD3Q96ES6 412 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 HSFY1Q96LI6 401 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 GATA5Q9BWX5 397 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-202ENST00000339438 JPH1Q9HDC5 661 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-202ENST00000339438 NECTIN3Q9NQS3 549 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 IGSF5Q9NSI5 407 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 OXSMQ9NWU1 459 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 OPTCQ9UBM4 332 aa5.56□□□□□ -1.52
CSDE1-202ENST00000339438 NUDT5Q9UKK9 219 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms