RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 DDX18Q9NVP1 670 aaKnown RBP11.76□□□□□ -0.53
DDR1-223ENST00000324771 TRPC4Q9UBN4 977 aa11.76□□□□□ -0.53
DDR1-223ENST00000324771 PADI4Q9UM07 663 aa11.76□□□□□ -0.53
DDR1-223ENST00000324771 DOLKQ9UPQ8 538 aa11.76□□□□□ -0.53
DDR1-223ENST00000324771 SORCS3Q9UPU3 1222 aa11.76□□□□□ -0.53
DDR1-223ENST00000324771 ARAP2Q8WZ64 1704 aa11.76□□□□□ -0.53
DDR1-223ENST00000324771 DNAJA2O60884 412 aa11.76□□□□□ -0.53
DDR1-223ENST00000324771 ATP6V1E1P36543 226 aa11.76□□□□□ -0.53
DDR1-223ENST00000324771 CYP4F2P78329 520 aa11.76□□□□□ -0.53
DDR1-223ENST00000324771 SMARCB1Q12824 385 aa11.76□□□□□ -0.53
DDR1-223ENST00000324771 MPPE1Q53F39 396 aa11.76□□□□□ -0.53
DDR1-223ENST00000324771 XKR6Q5GH73 641 aa11.76□□□□□ -0.53
DDR1-223ENST00000324771 SPPL2CQ8IUH8 684 aa11.76□□□□□ -0.53
DDR1-223ENST00000324771 RAB42Q8N4Z0 105 aa11.76□□□□□ -0.53
DDR1-223ENST00000324771 ATG16L2Q8NAA4 619 aa11.76□□□□□ -0.53
DDR1-223ENST00000324771 LPGAT1Q92604 370 aa11.76□□□□□ -0.53
DDR1-223ENST00000324771 DCUN1D5Q9BTE7 237 aa11.76□□□□□ -0.53
DDR1-223ENST00000324771 SPAG4Q9NPE6 437 aa11.76□□□□□ -0.53
DDR1-223ENST00000324771 OXSMQ9NWU1 459 aa11.76□□□□□ -0.53
DDR1-223ENST00000324771 CLIC5Q9NZA1 410 aa11.76□□□□□ -0.53
DDR1-223ENST00000324771 ZNF212Q9UDV6 495 aa11.76□□□□□ -0.53
DDR1-223ENST00000324771 FETUBQ9UGM5 382 aa11.76□□□□□ -0.53
DDR1-223ENST00000324771 NME7Q9Y5B8 376 aa11.76□□□□□ -0.53
DDR1-223ENST00000324771 RFPL2O75678 378 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 ETS2P15036 469 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 NCK1P16333 377 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 CHI3L1P36222 383 aaPredicted RBP11.75□□□□□ -0.53
DDR1-223ENST00000324771 PRKAG1P54619 331 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 ATP6V0D1P61421 351 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 HMGCS1Q01581 520 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 PPP1R8Q12972 351 aaKnown RBP11.75□□□□□ -0.53
DDR1-223ENST00000324771 SGCGQ13326 291 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 SQLEQ14534 574 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 PLCL1Q15111 1095 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 IL23RQ5VWK5 629 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 KIAA0408Q6ZU52 694 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 RDH11Q8TC12 318 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 MYLIPQ8WY64 445 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 ARNTL2Q8WYA1 636 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 IGSF21Q96ID5 467 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 MOCS1Q9NZB8 636 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 MCM8Q9UJA3 840 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 PSMD13Q9UNM6 376 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 TCRBV5S1A1TA0A578 114 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 CLOCKO15516 846 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 GPR39O43194 453 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 RGS14O43566 566 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 GABBR2O75899 941 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 HOXB8P17481 243 aaPredicted RBP11.75□□□□□ -0.53
DDR1-223ENST00000324771 VEGFBP49765 207 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 CASP9P55211 416 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 NAE1Q13564 534 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 KRT72Q14CN4 511 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 NEDD8Q15843 81 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 RELL1Q8IUW5 271 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 C12orf76Q8N812 135 aaPredicted RBP11.75□□□□□ -0.53
DDR1-223ENST00000324771 SORCS1Q8WY21 1168 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 GRIP2Q9C0E4 1043 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 BRD9Q9H8M2 597 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 ASF1AQ9Y294 204 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 PTGDR2Q9Y5Y4 395 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 KNTC1P50748 2209 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 TTC3P53804 2025 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 ANKRD66B4E2M5 251 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 HAS3O00219 553 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 IFRD1O00458 451 aaPredicted RBP11.75□□□□□ -0.53
DDR1-223ENST00000324771 PEX2P28328 305 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 PTPRRQ15256 657 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 MBLAC2Q68D91 279 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 TRIM48Q8IWZ4 208 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 FBXW8Q8N3Y1 598 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 TXNDC5Q8NBS9 432 aaKnown RBP11.75□□□□□ -0.53
DDR1-223ENST00000324771 ITFG1Q8TB96 612 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 MRGBPQ9NV56 204 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 TNPO3Q9Y5L0 923 aaKnown RBP11.75□□□□□ -0.53
DDR1-223ENST00000324771 ITGBL1O95965 494 aaPredicted RBP11.75□□□□□ -0.53
DDR1-223ENST00000324771 LDLRP01130 860 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 FYNP06241 537 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 FGF3P11487 239 aaPredicted RBP11.75□□□□□ -0.53
DDR1-223ENST00000324771 CYP2A6P11509 494 aaPredicted RBP11.75□□□□□ -0.53
DDR1-223ENST00000324771 COL6A2P12110 1019 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 COX7A2P14406 83 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 GCAP28676 217 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 RPIAP49247 311 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 PGFP49763 221 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 ACAP2Q15057 778 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 PPP1R3AQ16821 1122 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 PKDCCQ504Y2 493 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 GPR22Q99680 433 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 SCHIP1Q9P0W5 487 aaPredicted RBP11.75□□□□□ -0.53
DDR1-223ENST00000324771 POMPQ9Y244 141 aa11.75□□□□□ -0.53
DDR1-223ENST00000324771 H0Y858 1186 aa11.74□□□□□ -0.53
DDR1-223ENST00000324771 MLYCDO95822 493 aa11.74□□□□□ -0.53
DDR1-223ENST00000324771 EPHX1P07099 455 aa11.74□□□□□ -0.53
DDR1-223ENST00000324771 SERINC3Q13530 473 aa11.74□□□□□ -0.53
DDR1-223ENST00000324771 COLGALT2Q8IYK4 626 aa11.74□□□□□ -0.53
DDR1-223ENST00000324771 PARP8Q8N3A8 854 aa11.74□□□□□ -0.53
DDR1-223ENST00000324771 EEF1AKMT1Q8WVE0 214 aa11.74□□□□□ -0.53
DDR1-223ENST00000324771 CENPIQ92674 756 aaPredicted RBP11.74□□□□□ -0.53
DDR1-223ENST00000324771 NSUN5Q96P11 429 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms