RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 SMPD3Q9NY59 655 aaPredicted RBP20.93■□□□□ 0.94
RNF40-201ENST00000324685 GPN3Q9UHW5 284 aaPredicted RBP20.93■□□□□ 0.94
RNF40-201ENST00000324685 ZNF180Q9UJW8 692 aa20.93■□□□□ 0.94
RNF40-201ENST00000324685 ELOVL7A1L3X0 281 aa20.93■□□□□ 0.94
RNF40-201ENST00000324685 C5orf60A6NFR6 353 aa20.93■□□□□ 0.94
RNF40-201ENST00000324685 REP15Q6BDI9 236 aa20.93■□□□□ 0.94
RNF40-201ENST00000324685 GALNT5Q7Z7M9 940 aa20.93■□□□□ 0.94
RNF40-201ENST00000324685 PHC3Q8NDX5 983 aa20.93■□□□□ 0.94
RNF40-201ENST00000324685 CSPG4P5Q96PW8 444 aa20.93■□□□□ 0.94
RNF40-201ENST00000324685 MFSD1Q9H3U5 465 aa20.93■□□□□ 0.94
RNF40-201ENST00000324685 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.93■□□□□ 0.94
RNF40-201ENST00000324685 MYPNQ86TC9 1320 aa20.93■□□□□ 0.94
RNF40-201ENST00000324685 LYPLA2O95372 231 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 PPM1AP35813 382 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 LARS2Q15031 903 aaKnown RBP20.92■□□□□ 0.94
RNF40-201ENST00000324685 FIBCD1Q8N539 461 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 TNFRSF11BO00300 401 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 ITGA3P26006 1051 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 SNAPC1Q16533 368 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 SWI5Q1ZZU3 235 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 FAAH2Q6GMR7 532 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 ALG3Q92685 438 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 GBA3Q9H227 469 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 SSU72Q9NP77 194 aaKnown RBP20.92■□□□□ 0.94
RNF40-201ENST00000324685 FAM240BA0A1B0GVZ2 78 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 FADS2P1A8MWK0 482 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 TGFB1I1O43294 461 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 TSPAN9O75954 239 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 IGFALSP35858 605 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 ZNF132P52740 706 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 SWT1Q5T5J6 900 aaKnown RBP20.92■□□□□ 0.94
RNF40-201ENST00000324685 ARL10Q8N8L6 244 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 TSSK3Q96PN8 268 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 U3KQV3 271 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 B4GALT5O43286 388 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 TULP3O75386 442 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 ITPKAP23677 461 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 CTNNB1P35222 781 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 ZFP69Q49AA0 526 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 SDHAF4Q5VUM1 108 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 LCLAT1Q6UWP7 414 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 APOLD1Q96LR9 279 aa20.92■□□□□ 0.94
RNF40-201ENST00000324685 GNEQ9Y223 722 aaKnown RBP20.92■□□□□ 0.94
RNF40-201ENST00000324685 OAS3Q9Y6K5 1087 aaKnown RBP20.92■□□□□ 0.94
RNF40-201ENST00000324685 A0A1W2PQ67 120 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 SCAMP3O14828 347 aaKnown RBP20.91■□□□□ 0.94
RNF40-201ENST00000324685 ZNF697Q5TEC3 545 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 TRNT1Q96Q11 434 aaKnown RBP20.91■□□□□ 0.94
RNF40-201ENST00000324685 KCTD15Q96SI1 283 aaPredicted RBP20.91■□□□□ 0.94
RNF40-201ENST00000324685 CHCHD6Q9BRQ6 235 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 NMUR2Q9GZQ4 415 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 SNX7Q9UNH6 387 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 CLDN9O95484 217 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 CLHC1Q8NHS4 586 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 TUBA8Q9NY65 449 aaPredicted RBP20.91■□□□□ 0.94
RNF40-201ENST00000324685 TFECO14948 347 aaPredicted RBP20.91■□□□□ 0.94
RNF40-201ENST00000324685 TRMUO75648 421 aaKnown RBP20.91■□□□□ 0.94
RNF40-201ENST00000324685 INHBEP58166 350 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 PPP2R2BQ00005 443 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 SVOPLQ8N434 492 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 VGLL2Q8N8G2 317 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 STYXQ8WUJ0 223 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 MTRRQ9UBK8 725 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 A0A1W2PQ72 361 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 TP73O15350 636 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 SIN3BO75182 1162 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 CCNKO75909 580 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 PSMA1P25786 263 aaKnown RBP20.91■□□□□ 0.94
RNF40-201ENST00000324685 INTS6LQ5JSJ4 861 aaKnown RBP20.91■□□□□ 0.94
RNF40-201ENST00000324685 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.91■□□□□ 0.94
RNF40-201ENST00000324685 ADGRD1Q6QNK2 874 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 CLPTM1LQ96KA5 538 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 CIB1Q99828 191 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 SCELO95171 688 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 CCNE2O96020 404 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 ITPKBP27987 946 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 AP3S2P59780 193 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 NRG1Q02297 640 aaPredicted RBP20.91■□□□□ 0.94
RNF40-201ENST00000324685 SRSF11Q05519 484 aaKnown RBP20.91■□□□□ 0.94
RNF40-201ENST00000324685 RBM15BQ8NDT2 890 aaKnown RBP20.91■□□□□ 0.94
RNF40-201ENST00000324685 RNF208Q9H0X6 261 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 MSRAQ9UJ68 235 aa20.91■□□□□ 0.94
RNF40-201ENST00000324685 CNTNAP1P78357 1384 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 A0A1W2PQH9 124 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 CAPN8A6NHC0 703 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 AP2A2O94973 939 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 METTL18O95568 372 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 GPIP06744 558 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 SPAM1P38567 509 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 TARBP2Q15633 366 aaKnown RBP20.9■□□□□ 0.94
RNF40-201ENST00000324685 LCN1P1Q5VSP4 162 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 TMPRSS11BQ86T26 416 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 PARGQ86W56 976 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 PHYKPLQ8IUZ5 450 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 IRGQQ8WZA9 623 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 PCDHB18PQ96TA0 734 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 MAN2B2Q9Y2E5 1009 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 TRIM17Q9Y577 477 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 GMEB1Q9Y692 573 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 XKRYO14609 159 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms