RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 BSNQ9UPA5 3926 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 A8MUI8 341 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 LACTBL1A8MY62 500 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 SGK1O00141 431 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 CDX4O14627 284 aaPredicted RBP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 NVLO15381 856 aaKnown RBP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 BIRC5O15392 142 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 RPP40O75818 363 aaKnown RBP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 ZNF189O75820 626 aaPredicted RBP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 CYP7B1O75881 506 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 NEBLO76041 1014 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 ENDOD1O94919 500 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 HNRNPLP14866 589 aaKnown RBP eCLIP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 GM2AP17900 193 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 PAX7P23759 505 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 KDELR1P24390 212 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 RPL22P35268 128 aaKnown RBP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 PCK1P35558 622 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 MPLP40238 635 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 ETV4P43268 484 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 SSR1P43307 286 aaKnown RBP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 GABRB2P47870 512 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 PTDSS1P48651 473 aaKnown RBP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 GPR15P49685 360 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 ARFIP2P53365 341 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 LILRA4P59901 499 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 RPL26P61254 145 aaKnown RBP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 RPL7AP62424 266 aaKnown RBP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 YWHAHQ04917 246 aaPredicted RBP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 SLC34A1Q06495 639 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 PRKD1Q15139 912 aaPredicted RBP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 TRMT5Q32P41 509 aaKnown RBP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 ITPRIPL2Q3MIP1 535 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 AASDHQ4L235 1098 aaPredicted RBP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 TAF1BQ53T94 588 aaPredicted RBP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 C6orf163Q5TEZ5 329 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 DAB2IPQ5VWQ8 1189 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 ATG16L1Q676U5 607 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 IL31Q6EBC2 164 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 ANO7Q6IWH7 933 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 C3orf62Q6ZUJ4 267 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 SH2D5Q6ZV89 423 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 ADGRG6Q86SQ4 1221 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 TMPRSS6Q8IU80 811 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 SFTPA1Q8IWL2 248 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 YAF2Q8IY57 180 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 C4orf33Q8N1A6 199 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 ELMOD1Q8N336 334 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 ARHGAP18Q8N392 663 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 TTC39CQ8N584 583 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 AMER2Q8N7J2 671 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 GLIS1Q8NBF1 620 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 SLC4A11Q8NBS3 891 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 LEMD2Q8NC56 503 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 PPFIBP2Q8ND30 876 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 BVESQ8NE79 360 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 MCUQ8NE86 351 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 APPL2Q8NEU8 664 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 ACTL9Q8TC94 416 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 BPIFB1Q8TDL5 484 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 TCP10LQ8TDR4 215 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 ZFAND2BQ8WV99 257 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 USP13Q92995 863 aaPredicted RBP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 SKA1Q96BD8 255 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 FAM136AQ96C01 138 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 RTP4Q96DX8 246 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 MTBPQ96DY7 904 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 SPDL1Q96EA4 605 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 MSANTD3Q96H12 275 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 RCC1LQ96I51 464 aaKnown RBP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 SENP8Q96LD8 212 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 MCEEQ96PE7 176 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 NR1H4Q96RI1 486 aaPredicted RBP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 SLC22A12Q96S37 553 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 PAFAH2Q99487 392 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 SH3GL3Q99963 347 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 MSTO1Q9BUK6 570 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 TSSK1BQ9BXA7 367 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 CADM1Q9BY67 442 aaKnown RBP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 TRIM8Q9BZR9 551 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 FAM192AQ9GZU8 254 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 MEGF9Q9H1U4 602 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 C1orf21Q9H246 121 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 EBF3Q9H4W6 596 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 FAM96AQ9H5X1 160 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 STN1Q9H668 368 aaKnown RBP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 DENND2DQ9H6A0 471 aaPredicted RBP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 TASP1Q9H6P5 420 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 PRDM16Q9HAZ2 1276 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 SLCO1B3Q9NPD5 702 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 TMLHEQ9NVH6 421 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 DDX43Q9NXZ2 648 aaKnown RBP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 OBP2AQ9NY56 170 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 NKX1-2Q9UD57 310 aaPredicted RBP4.94□□□□□ -1.62
CKS1B-201ENST00000308987 GRID1Q9ULK0 1009 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 MAFFQ9ULX9 164 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 BOD1L1Q8NFC6 3051 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 CCDC163A0A0D9SF12 145 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 A0A1W2PPM1 405 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 LNP1A1A4G5 178 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms