RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 PSMD3O43242 534 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 SLC25A14O95258 325 aaPredicted RBP12.64□□□□□ -0.39
VPREB3-201ENST00000248948 METTL18O95568 372 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 MT-CO3P00414 261 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 LPOP22079 712 aaPredicted RBP12.64□□□□□ -0.39
VPREB3-201ENST00000248948 MSNP26038 577 aaKnown RBP12.64□□□□□ -0.39
VPREB3-201ENST00000248948 AK4P27144 223 aaPredicted RBP12.64□□□□□ -0.39
VPREB3-201ENST00000248948 ACTN2P35609 894 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 ACTR1BP42025 376 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 ACTR1AP61163 376 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 NR1D2Q14995 579 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 SIX1Q15475 284 aaPredicted RBP12.64□□□□□ -0.39
VPREB3-201ENST00000248948 CCNG2Q16589 344 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 ST3GAL2Q16842 350 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 ATP13A5Q4VNC0 1218 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 SLC30A9Q6PML9 568 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 RBM44Q6ZP01 1051 aaKnown RBP12.64□□□□□ -0.39
VPREB3-201ENST00000248948 MARK2Q7KZI7 788 aaKnown RBP12.64□□□□□ -0.39
VPREB3-201ENST00000248948 ZNF438Q7Z4V0 828 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 DDHD1Q8NEL9 900 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 BRSK1Q8TDC3 778 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 ZDHHC1Q8WTX9 485 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 APOL2Q9BQE5 337 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 NRSN2Q9GZP1 204 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 KCNF1Q9H3M0 494 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 TRIM39Q9HCM9 518 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 IL26Q9NPH9 171 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 JRKLQ9Y4A0 524 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 GPSM3Q9Y4H4 160 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 ST14Q9Y5Y6 855 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 APC2O95996 2303 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 NTN3O00634 580 aaPredicted RBP12.63□□□□□ -0.39
VPREB3-201ENST00000248948 GAPDHSO14556 408 aaPredicted RBP12.63□□□□□ -0.39
VPREB3-201ENST00000248948 STX7O15400 261 aaKnown RBP12.63□□□□□ -0.39
VPREB3-201ENST00000248948 GRID2O43424 1007 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 PRAMEF1O95521 474 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 FGGP02679 453 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 CAPNS1P04632 268 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 SLC2A4P14672 509 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 ZNF8P17098 575 aaPredicted RBP12.63□□□□□ -0.39
VPREB3-201ENST00000248948 FDFT1P37268 417 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 HADHAP40939 763 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 CLCNKAP51800 687 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 ZNF140P52738 457 aaPredicted RBP12.63□□□□□ -0.39
VPREB3-201ENST00000248948 CLDN6P56747 220 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 TARDBPQ13148 414 aaKnown RBP eCLIP12.63□□□□□ -0.39
VPREB3-201ENST00000248948 MSLNQ13421 630 aaPredicted RBP12.63□□□□□ -0.39
VPREB3-201ENST00000248948 OLIG2Q13516 323 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 SPIDRQ14159 915 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 RTP5Q14D33 572 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 LDLRAP1Q5SW96 308 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 DENND5AQ6IQ26 1287 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 FAM151BQ6UXP7 276 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 ADGRG6Q86SQ4 1221 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 LINC00523Q86TU6 105 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 CCDC89Q8N998 374 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 TIMM29Q9BSF4 260 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 CCDC86Q9H6F5 360 aaKnown RBP12.63□□□□□ -0.39
VPREB3-201ENST00000248948 BPIFA1Q9NP55 256 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 HOMER3Q9NSC5 361 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 SPATS2LQ9NUQ6 558 aaKnown RBP12.63□□□□□ -0.39
VPREB3-201ENST00000248948 PAK5Q9P286 719 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 ATXN10Q9UBB4 475 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 ZNF148Q9UQR1 794 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 PCYT1BQ9Y5K3 369 aaPredicted RBP12.63□□□□□ -0.39
VPREB3-201ENST00000248948 ARL5AQ9Y689 179 aa12.63□□□□□ -0.39
VPREB3-201ENST00000248948 UNC13CQ8NB66 2214 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 PKD1L2Q7Z442 2459 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 PIKFYVEQ9Y2I7 2098 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 D6RAR5 112 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 ZW10O43264 779 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 USP12O75317 370 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 CSO75390 466 aaKnown RBP12.62□□□□□ -0.39
VPREB3-201ENST00000248948 SUN1O94901 812 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 IFNB1P01574 187 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 ACP5P13686 325 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 FASLGP48023 281 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 SEMA5AQ13591 1074 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 GTF2H3Q13889 308 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 CLPPQ16740 277 aaPredicted RBP12.62□□□□□ -0.39
VPREB3-201ENST00000248948 ISXQ2M1V0 245 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 C4orf22Q6V702 233 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 CHST15Q7LFX5 561 aaPredicted RBP12.62□□□□□ -0.39
VPREB3-201ENST00000248948 SPRED1Q7Z699 444 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 LRRTM4Q86VH4 590 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 PROSER1Q86XN7 944 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 CCNJLQ8IV13 435 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 NAGSQ8N159 534 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 AVL9Q8NBF6 648 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 C1orf54Q8WWF1 131 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 OR2AG1Q9H205 316 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 EIF2B3Q9NR50 452 aaKnown RBP12.62□□□□□ -0.39
VPREB3-201ENST00000248948 ZNHIT2Q9UHR6 403 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 RABGEF1Q9UJ41 708 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 RNF215Q9Y6U7 377 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 CACNA1BQ00975 2339 aa12.62□□□□□ -0.39
VPREB3-201ENST00000248948 KIF26BQ2KJY2 2108 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 A6NCN8 305 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 TRABD2BA6NFA1 517 aa12.61□□□□□ -0.39
VPREB3-201ENST00000248948 AGAP14A8MT82 685 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms