RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 OR10A6Q8NH74 314 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 DLG3Q92796 817 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 TMEM159Q96B96 161 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 APOBEC3GQ9HC16 384 aaKnown RBP7.48□□□□□ -1.21
RIF1-201ENST00000243326 GIN1Q9NXP7 522 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 OAZ3Q9UMX2 235 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 PCDHB8Q9UN66 801 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 POMPQ9Y244 141 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 COL5A2P05997 1499 aaPredicted RBP7.48□□□□□ -1.21
RIF1-201ENST00000243326 TREHO43280 583 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 PAGE1O75459 146 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 ELK4P28324 431 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 RPL4P36578 427 aaKnown RBP7.48□□□□□ -1.21
RIF1-201ENST00000243326 VBP1P61758 197 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 MYBPC1Q00872 1141 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 P2RY8Q86VZ1 359 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 NAXEQ8NCW5 288 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 FNDC11Q9BVV2 318 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 SMURF2Q9HAU4 748 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 HEMK1Q9Y5R4 338 aaPredicted RBP7.48□□□□□ -1.21
RIF1-201ENST00000243326 PIP5K1BO14986 540 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 SLC26A4O43511 780 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 ZYG11AQ6WRX3 759 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 CPSF7Q8N684 471 aaKnown RBP7.48□□□□□ -1.21
RIF1-201ENST00000243326 PTCD3Q96EY7 689 aaKnown RBP7.48□□□□□ -1.21
RIF1-201ENST00000243326 NWD1Q149M9 1564 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 FAM237AA0A1B0GTK4 181 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 RPL10P27635 214 aaKnown RBP7.48□□□□□ -1.21
RIF1-201ENST00000243326 BACE1P56817 501 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 CAPSQ13938 189 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 EFR3AQ14156 821 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 APOLD1Q96LR9 279 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 ARHGEF28Q8N1W1 1705 aaKnown RBP7.48□□□□□ -1.21
RIF1-201ENST00000243326 RENBPP51606 427 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 MARSP56192 900 aaKnown RBP7.48□□□□□ -1.21
RIF1-201ENST00000243326 CSTF1Q05048 431 aaKnown RBP7.48□□□□□ -1.21
RIF1-201ENST00000243326 BCL2L1Q07817 233 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 THAP5Q7Z6K1 395 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 MAML3Q96JK9 1138 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 MRPL57Q9BQC6 102 aaKnown RBP7.48□□□□□ -1.21
RIF1-201ENST00000243326 SLC38A7Q9NVC3 462 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 COMMD9Q9P000 198 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 TMX2Q9Y320 296 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 NRXN1Q9ULB1 1477 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 A0A1W2PQH9 124 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 PRKD3O94806 890 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 ODF4Q2M2E3 257 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 AMER2Q8N7J2 671 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 OR9I1Q8NGQ6 314 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 C11orf24Q96F05 449 aaPredicted RBP7.48□□□□□ -1.21
RIF1-201ENST00000243326 EIF3KQ9UBQ5 218 aaKnown RBP7.48□□□□□ -1.21
RIF1-201ENST00000243326 FAM198AQ9UFP1 575 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 H3BRB1 525 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 NR2C2P49116 596 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 SNX17Q15036 470 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 ARMC12Q5T9G4 340 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 RNASEH2BQ5TBB1 312 aaKnown RBP7.48□□□□□ -1.21
RIF1-201ENST00000243326 HOMEZQ8IX15 550 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 CHST13Q8NET6 341 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 ZSCAN5AQ9BUG6 496 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 KRCC1Q9NPI7 259 aaPredicted RBP7.48□□□□□ -1.21
RIF1-201ENST00000243326 PTPRUQ92729 1446 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 MAGEB16A2A368 324 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 OR4F21O95013 312 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 SIX3O95343 332 aaPredicted RBP7.48□□□□□ -1.21
RIF1-201ENST00000243326 PRKAR1AP10644 381 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 PAX3P23760 479 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 RPS9P46781 194 aaKnown RBP7.48□□□□□ -1.21
RIF1-201ENST00000243326 EVPLQ92817 2033 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 SF3B1O75533 1304 aaKnown RBP eCLIP7.48□□□□□ -1.214e-6■■■■■ 37.3
RIF1-201ENST00000243326 TBL1XO60907 577 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 CYP3A4P08684 503 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 PPP2R1BP30154 601 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 CLCN2P51788 898 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 DGKQP52824 942 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 TAS2R41P59536 307 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 PRKG2Q13237 762 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 TOMM20Q15388 145 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 TTC23Q5W5X9 447 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 PDSS2Q86YH6 399 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 TMED9Q9BVK6 235 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 IGFLR1Q9H665 355 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 CYP3A43Q9HB55 503 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 ARHGAP28Q9P2N2 729 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 TMCO1Q9UM00 188 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 ZNF267Q14586 743 aaPredicted RBP7.48□□□□□ -1.21
RIF1-201ENST00000243326 ATAD3BQ5T9A4 648 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 PHC2Q8IXK0 858 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 EXOSC8Q96B26 276 aaKnown RBP7.48□□□□□ -1.21
RIF1-201ENST00000243326 ING3Q9NXR8 418 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 RHCGQ9UBD6 479 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 OMPP47874 163 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 BBS12Q6ZW61 710 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 STX12Q86Y82 276 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 FOXRED2Q8IWF2 684 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 DAW1Q8N136 415 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 GMCL1P1Q8NEA9 526 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 ADI1Q9BV57 179 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 ERGIC3Q9Y282 383 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 HACD1B0YJ81 288 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms