RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 TAS2R13Q9NYV9 303 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 STOML2Q9UJZ1 356 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 SPO11Q9Y5K1 396 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 PLXNA4Q9HCM2 1894 aa22.06■■□□□ 1.12
CCDC9-201ENST00000221922 MYOCOSA0A1B0GUC4 107 aa22.06■■□□□ 1.12
CCDC9-201ENST00000221922 KLHL33A6NCF5 533 aa22.06■■□□□ 1.12
CCDC9-201ENST00000221922 RHOBTB1O94844 696 aa22.06■■□□□ 1.12
CCDC9-201ENST00000221922 GPX3P22352 226 aa22.06■■□□□ 1.12
CCDC9-201ENST00000221922 SGSHP51688 502 aa22.06■■□□□ 1.12
CCDC9-201ENST00000221922 CARM1Q86X55 608 aa22.06■■□□□ 1.12
CCDC9-201ENST00000221922 CLYBLQ8N0X4 340 aa22.06■■□□□ 1.12
CCDC9-201ENST00000221922 OR4K2Q8NGD2 314 aa22.06■■□□□ 1.12
CCDC9-201ENST00000221922 OR9I1Q8NGQ6 314 aa22.06■■□□□ 1.12
CCDC9-201ENST00000221922 SH3RF2Q8TEC5 729 aa22.06■■□□□ 1.12
CCDC9-201ENST00000221922 PBXIP1Q96AQ6 731 aa22.06■■□□□ 1.12
CCDC9-201ENST00000221922 MTF2Q9Y483 593 aaPredicted RBP22.06■■□□□ 1.12
CCDC9-201ENST00000221922 ABHD14A-ACY1A0A1B0GW23 586 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 UBA6A0AVT1 1052 aaPredicted RBP22.05■■□□□ 1.12
CCDC9-201ENST00000221922 C2orf78A6NCI8 922 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 BBIP1A8MTZ0 92 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 PFDN6O15212 129 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 NDUFS3O75489 264 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 CSPG5O95196 566 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 ALDOCP09972 364 aaKnown RBP22.05■■□□□ 1.12
CCDC9-201ENST00000221922 C3orf30Q96M34 536 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 EFHD1Q9BUP0 239 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 ADGRE3Q9BY15 652 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 DERL2Q9GZP9 239 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 LATS1O95835 1130 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 ASLP04424 464 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 FGF4P08620 206 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 ATP6V0D1P61421 351 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 HTRA3P83110 453 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 CYTH1Q15438 398 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 HMBOX1Q6NT76 420 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 DHFR2Q86XF0 187 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 SNX31Q8N9S9 440 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 EXT2Q93063 718 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 KIAA1191Q96A73 305 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 HIC2Q96JB3 615 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 ATOH8Q96SQ7 321 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 GPATCH1Q9BRR8 931 aaKnown RBP22.05■■□□□ 1.12
CCDC9-201ENST00000221922 FBRSL1Q9HCM7 1045 aaKnown RBP22.05■■□□□ 1.12
CCDC9-201ENST00000221922 SNX13Q9Y5W8 968 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 AK5Q9Y6K8 562 aa22.05■■□□□ 1.12
CCDC9-201ENST00000221922 CARNS1A5YM72 827 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 PDLIM1O00151 329 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 CBX4O00257 560 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 KERAO60938 352 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 URODP06132 367 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 HSPA8P11142 646 aaKnown RBP22.04■■□□□ 1.12
CCDC9-201ENST00000221922 LAG3P18627 525 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 LPOP22079 712 aaPredicted RBP22.04■■□□□ 1.12
CCDC9-201ENST00000221922 STX1BP61266 288 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 RAD51Q06609 339 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 BIRC2Q13490 618 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 OR4D1Q15615 310 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 EML3Q32P44 896 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 MTX3Q5HYI7 312 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 CYP2R1Q6VVX0 501 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 ZNF783Q6ZMS7 281 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 DDX53Q86TM3 631 aaKnown RBP22.04■■□□□ 1.12
CCDC9-201ENST00000221922 TCEAL8Q8IYN2 117 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 ANKFN1Q8N957 763 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 PCYOX1LQ8NBM8 494 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 STAG3L4Q8TBR4 150 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 EXOC2Q96KP1 924 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 SLC29A1Q99808 456 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 MUC3BQ9H195 1237 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 AKTIPQ9H8T0 292 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 TMEM39AQ9NV64 488 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 ARMC1Q9NVT9 282 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 CNOT6Q9ULM6 557 aaKnown RBP22.04■■□□□ 1.12
CCDC9-201ENST00000221922 MAFFQ9ULX9 164 aa22.04■■□□□ 1.12
CCDC9-201ENST00000221922 ATP6AP2A0A1C7CYW4 349 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 ARHGAP10A1A4S6 786 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 LCHNA4D1U4 455 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 PRRG1O14668 218 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 ATP6AP2O75787 350 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 PRLP01236 227 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 IRF1P10914 325 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 TSPAN8P19075 237 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 SLC7A2P52569 658 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 NAA20P61599 178 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 SH3BP2P78314 561 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 TWF1Q12792 350 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 CXorf57Q6NSI4 855 aaKnown RBP22.03■■□□□ 1.12
CCDC9-201ENST00000221922 LAYNQ6UX15 382 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 DNAJB7Q7Z6W7 309 aaPredicted RBP22.03■■□□□ 1.12
CCDC9-201ENST00000221922 LPCAT1Q8NF37 534 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 WBP2Q969T9 261 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 NSMCE3Q96MG7 304 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 SPG21Q9NZD8 308 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 RAI2Q9Y5P3 530 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 DNAJC15Q9Y5T4 150 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 UBXN8O00124 270 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 PYGLP06737 847 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 BMP2P12643 396 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 GFAPP14136 432 aa22.03■■□□□ 1.12
CCDC9-201ENST00000221922 TMEM259Q4ZIN3 620 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms