RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Adamts14E9PX39 1209 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Glyatl3E9Q5L8 290 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gm10639E9Q6L7 222 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gm17615E9Q9P2 165 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Vmn2r86G5E8Y4 848 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Hk2O08528 917 aaKnown RBP11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Cdh16O88338 830 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gsta2P10648 222 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gdi1P50396 447 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ctps2P70303 586 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Pwp2Q8BU03 919 aaKnown RBP11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Fam110bQ8C739 366 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Hid1Q8R1F6 788 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Olfr722Q8VFC8 308 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 DgkgQ91WG7 788 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 TfQ921I1 697 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Pacsin3Q99JB8 424 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Pmf1Q9CPV5 202 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ssu72Q9CY97 194 aaKnown RBP11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Vmn1r65Q9EPS7 332 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Fndc3c1Q6DFV6 1356 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Tmem236A2ARJ3 344 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 BC049352E9Q2Z6 85 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Tmem65Q4VAE3 234 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 WlsQ6DID7 541 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Rad54bQ6PFE3 886 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Olfr664Q7TRP5 306 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Camk1dQ8BW96 385 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ipo13Q8K0C1 963 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Trim31Q8R0K2 507 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Pex19Q8VCI5 299 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Olfr606Q8VGZ8 319 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Fundc1Q9DB70 155 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Hey2Q9QUS4 339 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Scn3aA2ASI5 1947 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 ZxdbA2CE44 873 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Dnmt3aO88508 908 aaKnown RBP11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Mxd1P50538 227 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Lhx1P63006 406 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Znf583Q3V080 568 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Rassf5Q5EBH1 413 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 9930111J21Rik1Q5SVP0 844 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 MarcoQ60754 518 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Hbs1lQ69ZS7 682 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Nudcd1Q6PIP5 582 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Dnajc15Q78YY6 149 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 4930503B20RikQ80ZP0 234 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Zbtb46Q8BID6 600 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Lrrc19Q8BZT5 364 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Epm2aip1Q8VEH5 606 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Arhgap8Q9CXP4 425 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Rnf225Q9D7D1 332 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Panx1Q9JIP4 426 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Bace2Q9JL18 514 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ccdc163A2AGD7 326 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Slc6a20bO88575 635 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Epb42P49222 691 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Psen1P49769 467 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Psme3P61290 254 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Cnpy4Q8BQ47 245 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 4931406P16RikQ8C5X1 1059 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ifnl3Q8CGK6 193 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Mill2Q8HWE5 355 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Nudt13Q8JZU0 352 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 RergQ8R367 199 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Slc6a20aQ8VDB9 592 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Socs4Q91ZA6 436 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Cstf3Q99LI7 717 aaKnown RBP11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Mrpl46Q9EQI8 283 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Il22Q9JJY9 179 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Psmd13Q9WVJ2 376 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Arfgef1G3X9K3 1846 aaKnown RBP11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Clip3B9EHT4 547 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Nrg3O35181 713 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Cbx4O55187 551 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Anxa6P14824 673 aaKnown RBP11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gad2P48320 585 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Msx2Q03358 267 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Srek1ip1Q4V9W2 153 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Dnajc11Q5U458 559 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Rfx4Q7TNK1 735 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 MtdhQ80WJ7 579 aaKnown RBP11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ubash3bQ8BGG7 638 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 C1raQ8CG16 707 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Tram1l1Q8QZR0 363 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Kcnc4Q8R1C0 628 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 GatbQ99JT1 557 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 LsrQ99KG5 594 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Msh4Q99MT2 958 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gpc1Q9QZF2 557 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Klhl18A0A0G2JGN5 579 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Vmn2r2L7N2E9 908 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 NoctO35710 429 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Cd2P08920 344 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 NfycP70353 335 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Prss55Q14BX2 321 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gpr165Q3V3A3 455 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Nomo1Q6GQT9 1214 aaKnown RBP11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 CyldQ80TQ2 952 aa11.8□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Smndc1Q8BGT7 238 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms