RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Sapcd1Q9CY86 146 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Akr1c12Q9JLI0 323 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Rdh11Q9QYF1 316 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Adam18Q9R157 719 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 FarsbQ9WUA2 589 aaKnown RBP9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Adam17Q9Z0F8 827 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Pramef17A2ASJ1 475 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 PotegA5H0M4 473 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Prss40A6H6T1 365 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 C87414E9PWI7 475 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm16506F7ANP4 213 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Polr2jO08740 117 aaKnown RBP9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tlx3O55144 291 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Itgb5O70309 798 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Epha3P29319 983 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Nr5a2P45448 560 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tmem184cQ3TPR7 525 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Hk3Q3TRM8 922 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 MyrflQ3UN70 904 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Mfhas1Q3V1N1 1048 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Angptl1Q640P2 490 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 RfflQ6ZQM0 377 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Zbtb46Q8BID6 600 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Fnbp1lQ8K012 605 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Nle1Q8VEJ4 485 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Lpgat1Q91YX5 370 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tas1r3Q925D8 858 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Anks3Q9CZK6 655 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Kat8Q9D1P2 458 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cpxm2Q9D2L5 764 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 TrmuQ9DAT5 417 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Hcar2Q9EP66 360 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 4931408C20RikE9PWP9 1381 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 TomtA1Y9I9 258 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Vmn2r19G5E8G4 854 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Matn2O08746 956 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Aif1O70200 147 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 LgmnO89017 435 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Sh3pxd2aO89032 1124 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Eno2P17183 434 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Psen1P49769 467 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ap1s1P61967 158 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 AbrQ5SSL4 859 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Rbl1Q64701 1063 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tgm6Q8BM11 706 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Spata2lQ8BNN1 426 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Fam163bQ8BUM6 167 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Usp20Q8C6M1 916 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Olfr784Q8VFZ9 319 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Senp2Q91ZX6 588 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tcaf2Q921K8 919 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Slc26a5Q99NH7 744 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 EcdQ9CS74 641 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Atp6ap2Q9CYN9 350 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 MtpapQ9D0D3 585 aaKnown RBP9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Sertad2Q9JJG5 309 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Actl7bQ9QY83 418 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 SqorQ9R112 450 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ttll8A4Q9F1 832 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Slfn9B1ARD6 910 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm16427J3QN52 483 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tnfrsf18O35714 228 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Apba2P98084 750 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Lgals3bpQ07797 577 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Usp30Q3UN04 517 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ag2Q3UPL5 249 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Prom2Q3UUY6 835 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Abl2Q4JIM5 1182 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Bcar1Q61140 874 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Eif2b4Q61749 524 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cpsf6Q6NVF9 551 aaKnown RBP9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Olfr813Q7TRH5 310 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Snx32Q80ZJ7 404 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Rfwd3Q8CIK8 774 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 HyiQ8R1F5 277 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Arhgef3Q91X46 524 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Golm1Q91XA2 393 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Atg13Q91YI1 516 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 MlycdQ99J39 492 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Slc12a9Q99MR3 914 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gemin2Q9CQQ4 269 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cnot11Q9CWN7 505 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Olfr703Q9EPF5 319 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Msl3Q9WVG9 525 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 CpqQ9WVJ3 470 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ddi2A2ADY9 399 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm3594E9Q2A7 267 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Pgam2O70250 253 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Slc28a2O88627 660 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tuba3aP05214 450 aaKnown RBP9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Bmp4P21275 408 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cfl2P45591 166 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Hsd17b2P51658 381 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Aqp8P56404 261 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ankdd1bQ14DN9 521 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Rnf44Q3UHJ8 407 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ankrd13bQ5F259 626 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Sema4aQ62178 760 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Orai3Q6P8G8 290 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Samd3Q8C4H2 520 aa9.12□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms