RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 LYSMD1Q96S90 227 aa16.33■□□□□ 0.2
LINC00628-201ENST00000628516 CMKLR1Q99788 373 aa16.33■□□□□ 0.2
LINC00628-201ENST00000628516 MLPHQ9BV36 600 aaPredicted RBP16.33■□□□□ 0.2
LINC00628-201ENST00000628516 RDH14Q9HBH5 336 aa16.33■□□□□ 0.2
LINC00628-201ENST00000628516 PCDHGA7Q9Y5G6 932 aa16.33■□□□□ 0.2
LINC00628-201ENST00000628516 ALG6Q9Y672 507 aa16.33■□□□□ 0.2
LINC00628-201ENST00000628516 ZNF487B1APH4 448 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 ANKRD66B4E2M5 251 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 KALRNO60229 2985 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 CPNE6O95741 557 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 KRT1P04264 644 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 MMP2P08253 660 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 ITIH1P19827 911 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 IFI35P80217 286 aaPredicted RBP16.32■□□□□ 0.2
LINC00628-201ENST00000628516 RHDQ02161 417 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 QPCTQ16769 361 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 PYCR3Q53H96 274 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 TAF1BQ53T94 588 aaPredicted RBP16.32■□□□□ 0.2
LINC00628-201ENST00000628516 FAM182AQ5T1J6 154 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 SLC9A4Q6AI14 798 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 C11orf63Q6NUN7 778 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 USP53Q70EK8 1073 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 ZNF438Q7Z4V0 828 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 RFX6Q8HWS3 928 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 SLITRK4Q8IW52 837 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 RAVER1Q8IY67 606 aaKnown RBP16.32■□□□□ 0.2
LINC00628-201ENST00000628516 CNTD1Q8N815 330 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 CCHCR1Q8TD31 782 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 TMEM159Q96B96 161 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 COX14Q96I36 57 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 ADGRE3Q9BY15 652 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 CEP41Q9BYV8 373 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 SEMA6CQ9H3T2 930 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 PKD2L2Q9NZM6 624 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 SEPT10Q9P0V9 454 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 SSUH2Q9Y2M2 353 aa16.32■□□□□ 0.2
LINC00628-201ENST00000628516 ATMQ13315 3056 aa16.31■□□□□ 0.2
LINC00628-201ENST00000628516 C3orf70A6NLC5 250 aaPredicted RBP16.31■□□□□ 0.2
LINC00628-201ENST00000628516 ERVH48-1M5A8F1 160 aa16.31■□□□□ 0.2
LINC00628-201ENST00000628516 CCDC175P0C221 793 aa16.31■□□□□ 0.2
LINC00628-201ENST00000628516 ZFXP17010 805 aaPredicted RBP16.31■□□□□ 0.2
LINC00628-201ENST00000628516 SPINT3P49223 89 aa16.31■□□□□ 0.2
LINC00628-201ENST00000628516 C19orf57Q0VDD7 668 aa16.31■□□□□ 0.2
LINC00628-201ENST00000628516 GALNT3Q14435 633 aa16.31■□□□□ 0.2
LINC00628-201ENST00000628516 NR1D2Q14995 579 aa16.31■□□□□ 0.2
LINC00628-201ENST00000628516 PDK1Q15118 436 aa16.31■□□□□ 0.2
LINC00628-201ENST00000628516 NPNTQ6UXI9 565 aa16.31■□□□□ 0.2
LINC00628-201ENST00000628516 CCDC81Q6ZN84 652 aa16.31■□□□□ 0.2
LINC00628-201ENST00000628516 VSIG1Q86XK7 387 aa16.31■□□□□ 0.2
LINC00628-201ENST00000628516 RNF25Q96BH1 459 aaPredicted RBP16.31■□□□□ 0.2
LINC00628-201ENST00000628516 AGAP3Q96P47 875 aa16.31■□□□□ 0.2
LINC00628-201ENST00000628516 KCNF1Q9H3M0 494 aa16.31■□□□□ 0.2
LINC00628-201ENST00000628516 FAM83DQ9H4H8 585 aa16.31■□□□□ 0.2
LINC00628-201ENST00000628516 AKAP7Q9P0M2 348 aaPredicted RBP16.31■□□□□ 0.2
LINC00628-201ENST00000628516 ZNHIT2Q9UHR6 403 aa16.31■□□□□ 0.2
LINC00628-201ENST00000628516 GRID2IPA4D2P6 1211 aa16.3■□□□□ 0.2
LINC00628-201ENST00000628516 K7ENP7 123 aa16.3■□□□□ 0.2
LINC00628-201ENST00000628516 PPP1R12AO14974 1030 aaPredicted RBP16.3■□□□□ 0.2
LINC00628-201ENST00000628516 PPM1DO15297 605 aa16.3■□□□□ 0.2
LINC00628-201ENST00000628516 ATP1A1P05023 1023 aaKnown RBP16.3■□□□□ 0.2
LINC00628-201ENST00000628516 ETV5P41161 510 aa16.3■□□□□ 0.2
LINC00628-201ENST00000628516 GPR3P46089 330 aa16.3■□□□□ 0.2
LINC00628-201ENST00000628516 MAPK10P53779 464 aa16.3■□□□□ 0.2
LINC00628-201ENST00000628516 DYNLT1P63172 113 aa16.3■□□□□ 0.2
LINC00628-201ENST00000628516 LRP8Q14114 963 aa16.3■□□□□ 0.2
LINC00628-201ENST00000628516 LRRC38Q5VT99 294 aa16.3■□□□□ 0.2
LINC00628-201ENST00000628516 NKAIN2Q5VXU1 208 aa16.3■□□□□ 0.2
LINC00628-201ENST00000628516 INO80CQ6PI98 192 aaPredicted RBP16.3■□□□□ 0.2
LINC00628-201ENST00000628516 PCSK4Q6UW60 755 aa16.3■□□□□ 0.2
LINC00628-201ENST00000628516 B4GALNT4Q76KP1 1039 aa16.3■□□□□ 0.2
LINC00628-201ENST00000628516 KDELC2Q7Z4H8 507 aa16.3■□□□□ 0.2
LINC00628-201ENST00000628516 NT5DC3Q86UY8 548 aa16.3■□□□□ 0.2
LINC00628-201ENST00000628516 RHOT1Q8IXI2 618 aa16.3■□□□□ 0.2
LINC00628-201ENST00000628516 CALR3Q96L12 384 aaKnown RBP16.3■□□□□ 0.2
LINC00628-201ENST00000628516 OLFM3Q96PB7 478 aa16.3■□□□□ 0.2
LINC00628-201ENST00000628516 WDR24Q96S15 920 aa16.3■□□□□ 0.2
LINC00628-201ENST00000628516 CCNL2Q96S94 520 aaPredicted RBP16.3■□□□□ 0.2
LINC00628-201ENST00000628516 NUDT22Q9BRQ3 303 aa16.3■□□□□ 0.2
LINC00628-201ENST00000628516 TSGA10Q9BZW7 698 aa16.3■□□□□ 0.2
LINC00628-201ENST00000628516 DDX56Q9NY93 547 aaKnown RBP16.3■□□□□ 0.2
LINC00628-201ENST00000628516 CNOT6Q9ULM6 557 aaKnown RBP16.3■□□□□ 0.2
LINC00628-201ENST00000628516 GUCA1BQ9UMX6 200 aa16.3■□□□□ 0.2
LINC00628-201ENST00000628516 PRKAB1Q9Y478 270 aa16.3■□□□□ 0.2
LINC00628-201ENST00000628516 OAS3Q9Y6K5 1087 aaKnown RBP16.3■□□□□ 0.2
LINC00628-201ENST00000628516 TRBV23OR9-2A0A075B6M9 112 aa16.29■□□□□ 0.2
LINC00628-201ENST00000628516 PRAMEF33A0A0G2JMD5 474 aa16.29■□□□□ 0.2
LINC00628-201ENST00000628516 RGSL1A5PLK6 1076 aa16.29■□□□□ 0.2
LINC00628-201ENST00000628516 FADS2P1A8MWK0 482 aa16.29■□□□□ 0.2
LINC00628-201ENST00000628516 NVLO15381 856 aaKnown RBP16.29■□□□□ 0.2
LINC00628-201ENST00000628516 PRAMEF10O60809 474 aa16.29■□□□□ 0.2
LINC00628-201ENST00000628516 C1QL1O75973 258 aa16.29■□□□□ 0.2
LINC00628-201ENST00000628516 CD1CP29017 333 aa16.29■□□□□ 0.2
LINC00628-201ENST00000628516 C16orf72Q14CZ0 275 aa16.29■□□□□ 0.2
LINC00628-201ENST00000628516 CLPPQ16740 277 aaPredicted RBP16.29■□□□□ 0.2
LINC00628-201ENST00000628516 HENMT1Q5T8I9 393 aaKnown RBP16.29■□□□□ 0.2
LINC00628-201ENST00000628516 MFSD7Q6UXD7 560 aa16.29■□□□□ 0.2
LINC00628-201ENST00000628516 ZNF574Q6ZN55 896 aaPredicted RBP16.29■□□□□ 0.2
LINC00628-201ENST00000628516 CHST15Q7LFX5 561 aaPredicted RBP16.29■□□□□ 0.2
LINC00628-201ENST00000628516 LYSMD3Q7Z3D4 306 aa16.29■□□□□ 0.2
LINC00628-201ENST00000628516 RCBTB1Q8NDN9 531 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms