RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 CDH22Q9UJ99 828 aa13.03□□□□□ -0.32
USP6NL-205ENST00000609104 MT-ND1P03886 318 aa13.03□□□□□ -0.32
USP6NL-205ENST00000609104 ELFN1P0C7U0 828 aa13.03□□□□□ -0.32
USP6NL-205ENST00000609104 CBX2Q14781 532 aaPredicted RBP13.03□□□□□ -0.32
USP6NL-205ENST00000609104 RAVER1Q8IY67 606 aaKnown RBP13.03□□□□□ -0.32
USP6NL-205ENST00000609104 OR10H5Q8NGA6 315 aa13.03□□□□□ -0.32
USP6NL-205ENST00000609104 CERKQ8TCT0 537 aa13.03□□□□□ -0.32
USP6NL-205ENST00000609104 PURBQ96QR8 312 aaKnown RBP13.03□□□□□ -0.32
USP6NL-205ENST00000609104 MGAT4AQ9UM21 535 aa13.03□□□□□ -0.32
USP6NL-205ENST00000609104 SLC9A3R1O14745 358 aaPredicted RBP13.02□□□□□ -0.32
USP6NL-205ENST00000609104 IKBKEQ14164 716 aa13.02□□□□□ -0.32
USP6NL-205ENST00000609104 LRRC38Q5VT99 294 aa13.02□□□□□ -0.32
USP6NL-205ENST00000609104 PHF13Q86YI8 300 aaPredicted RBP13.02□□□□□ -0.32
USP6NL-205ENST00000609104 MTMR9Q96QG7 549 aa13.02□□□□□ -0.32
USP6NL-205ENST00000609104 NRCAMQ92823 1304 aa13.02□□□□□ -0.32
USP6NL-205ENST00000609104 GCATO75600 419 aa13.02□□□□□ -0.32
USP6NL-205ENST00000609104 CABYRO75952 493 aa13.02□□□□□ -0.32
USP6NL-205ENST00000609104 DBIP07108 87 aaKnown RBP13.02□□□□□ -0.32
USP6NL-205ENST00000609104 ITPKAP23677 461 aa13.02□□□□□ -0.32
USP6NL-205ENST00000609104 ICAM3P32942 547 aa13.02□□□□□ -0.32
USP6NL-205ENST00000609104 TIGD2Q4W5G0 525 aa13.02□□□□□ -0.32
USP6NL-205ENST00000609104 SLC4A11Q8NBS3 891 aa13.02□□□□□ -0.32
USP6NL-205ENST00000609104 TNFAIP8L1Q8WVP5 186 aa13.02□□□□□ -0.32
USP6NL-205ENST00000609104 ART5Q96L15 291 aa13.02□□□□□ -0.32
USP6NL-205ENST00000609104 TSSK3Q96PN8 268 aa13.02□□□□□ -0.32
USP6NL-205ENST00000609104 P2RX7Q99572 595 aaKnown RBP13.02□□□□□ -0.32
USP6NL-205ENST00000609104 LRTM1Q9HBL6 345 aa13.02□□□□□ -0.32
USP6NL-205ENST00000609104 OSER1Q9NX31 292 aa13.02□□□□□ -0.32
USP6NL-205ENST00000609104 CACNA1FO60840 1977 aa13.02□□□□□ -0.32
USP6NL-205ENST00000609104 PPIBP23284 216 aaKnown RBP13.02□□□□□ -0.32
USP6NL-205ENST00000609104 SIM2Q14190 667 aaPredicted RBP13.02□□□□□ -0.32
USP6NL-205ENST00000609104 IQSEC1Q6DN90 963 aa13.02□□□□□ -0.32
USP6NL-205ENST00000609104 CPSF7Q8N684 471 aaKnown RBP13.02□□□□□ -0.32
USP6NL-205ENST00000609104 ZNF557Q8N988 423 aaPredicted RBP13.02□□□□□ -0.32
USP6NL-205ENST00000609104 FATE1Q969F0 183 aa13.02□□□□□ -0.32
USP6NL-205ENST00000609104 SLC4A9Q96Q91 983 aa13.02□□□□□ -0.32
USP6NL-205ENST00000609104 TOR3AQ9H497 397 aa13.02□□□□□ -0.32
USP6NL-205ENST00000609104 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.02□□□□□ -0.32
USP6NL-205ENST00000609104 TIMM22Q9Y584 194 aa13.02□□□□□ -0.32
USP6NL-205ENST00000609104 WRBO00258 174 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 FGBP02675 491 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 ZBTB6Q15916 424 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 OR8H3Q8N146 312 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 SETD6Q8TBK2 473 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 AP2M1Q96CW1 435 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 CEP170BQ9Y4F5 1589 aaPredicted RBP13.02□□□□□ -0.33
USP6NL-205ENST00000609104 CCNDBP1O95273 360 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 ERBB2P04626 1255 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 REP15Q6BDI9 236 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 CHIAQ9BZP6 476 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 NEUROD4Q9HD90 331 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 FRMPD1Q5SYB0 1578 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 XKRYO14609 159 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 TSPAN4O14817 238 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 TGDSO95455 350 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 XIAPP98170 497 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 TEX46H3BTG2 121 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 TNFRSF11BO00300 401 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 P2RY11Q96G91 374 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 KCND1Q9NSA2 647 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 IMP3Q9NV31 184 aaKnown RBP13.02□□□□□ -0.33
USP6NL-205ENST00000609104 NWD1Q149M9 1564 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 MID1O15344 667 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 ATF4P18848 351 aaPredicted RBP13.02□□□□□ -0.33
USP6NL-205ENST00000609104 PSEN1P49768 467 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 KLF10Q13118 480 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 CCNYL2Q5T2Q4 361 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 HECTD2Q5U5R9 776 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 OGFOD2Q6N063 350 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 HELQQ8TDG4 1101 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 SOCS4Q8WXH5 440 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 UROC1Q96N76 676 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 RAB26Q9ULW5 256 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 MFHAS1Q9Y4C4 1052 aa13.02□□□□□ -0.33
USP6NL-205ENST00000609104 YDJCA8MPS7 323 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 PSMD9O00233 223 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 ACTR3P61158 418 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 GTF2BQ00403 316 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 IL17AQ16552 155 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 TPST2O60704 377 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 MATKP42679 507 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 SLC30A6Q6NXT4 461 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 TRABD2AQ86V40 505 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 NAT14Q8WUY8 206 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 COPS5Q92905 334 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 CST11Q9H112 138 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 ACSS3Q9H6R3 686 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 TMLHEQ9NVH6 421 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 ANKS1BQ7Z6G8 1248 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 OR2L3Q8NG85 312 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 DNASE1L2Q92874 299 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 NXF3Q9H4D5 531 aaKnown RBP13.01□□□□□ -0.33
USP6NL-205ENST00000609104 ALG2Q9H553 416 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 ELOVL7A1L3X0 281 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 SLC30A4O14863 429 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 EPHB6O15197 1021 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 FFAR2O15552 330 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 ZNF132P52740 706 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 LCN1P1Q5VSP4 162 aa13.01□□□□□ -0.33
USP6NL-205ENST00000609104 AHSA2Q719I0 299 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms