RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-222	ENST00000600517	KNTC1	P50748	2209 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	NOBOX	O60393	691 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	DNAJC6	O75061	913 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	ASMTL	O95671	621 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	PSMB4	P28070	264 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	PEX6	Q13608	980 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	LRP8	Q14114	963 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	PARP6	Q2NL67	630 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	SEL1L2	Q5TEA6	688 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	C17orf82	Q86X59	251 aa	Predicted RBP	13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	SLC13A5	Q86YT5	568 aa	Predicted RBP	13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	FAM71D	Q8N9W8	422 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	WDR48	Q8TAF3	677 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	PLEKHG4B	Q96PX9	1271 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	ALS2CR12	Q96Q35	445 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	OR2M4	Q96R27	311 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	CARD9	Q9H257	536 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	CCDC86	Q9H6F5	360 aa	Known RBP	13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	RMI1	Q9H9A7	625 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	TRIM39	Q9HCM9	518 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	IL17C	Q9P0M4	197 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	TAAR2	Q9P1P5	351 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	DKK4	Q9UBT3	224 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	PLEKHM1	Q9Y4G2	1056 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	GPSM3	Q9Y4H4	160 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	OAS3	Q9Y6K5	1087 aa	Known RBP	13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	PTPRB	P23467	1997 aa		13.36	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	PLXNB3	Q9ULL4	1909 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	SLC25A14	O95258	325 aa	Predicted RBP	13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	SLC4A1	P02730	911 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	PNLIP	P16233	465 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	GLB1	P16278	677 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	AK4	P27144	223 aa	Predicted RBP	13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	STIP1	P31948	543 aa	Known RBP	13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	RTP5	Q14D33	572 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	C14orf28	Q4W4Y0	310 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	ZDHHC20	Q5W0Z9	365 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	ALS2CL	Q60I27	953 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	MARK2	Q7KZI7	788 aa	Known RBP	13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	GALNT13	Q8IUC8	556 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	SFTPA2	Q8IWL1	248 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	TRIM58	Q8NG06	486 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	BLOC1S5	Q8TDH9	187 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	GLYATL1	Q969I3	302 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	CCDC3	Q9BQI4	270 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	TMEM121	Q9BTD3	319 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	FICD	Q9BVA6	458 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	NRSN2	Q9GZP1	204 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	ARNT2	Q9HBZ2	717 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	BPIFA1	Q9NP55	256 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	IL26	Q9NPH9	171 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	ZNHIT2	Q9UHR6	403 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	APPL1	Q9UKG1	709 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	ASPM	Q8IZT6	3477 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	LRP4	O75096	1905 aa		13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.35	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	LIAS	O43766	372 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	NUDT21	O43809	227 aa	Known RBP	13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	NUAK1	O60285	661 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	PPFIA2	O75334	1257 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	TCEA3	O75764	348 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	METTL18	O95568	372 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	GDF10	P55107	478 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	CYP4F3	Q08477	520 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	MSLN	Q13421	630 aa	Predicted RBP	13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	ZNF569	Q5MCW4	686 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	CERCAM	Q5T4B2	595 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	KCTD11	Q693B1	232 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	DENND5A	Q6IQ26	1287 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	SLC30A9	Q6PML9	568 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	ARHGEF18	Q6ZSZ5	1173 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	GLT6D1	Q7Z4J2	308 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	ATG4A	Q8WYN0	398 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	CCDC74A	Q96AQ1	378 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	GRAMD1A	Q96CP6	724 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	RTP4	Q96DX8	246 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	DEPDC7	Q96QD5	511 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	VPS35	Q96QK1	796 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	APOL2	Q9BQE5	337 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	TLR10	Q9BXR5	811 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	LRIT1	Q9P2V4	623 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	ATXN10	Q9UBB4	475 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	RABGEF1	Q9UJ41	708 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	TMPRSS11E	Q9UL52	423 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	ZMIZ1	Q9ULJ6	1067 aa		13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	13.34	□□□□□ -0.27
ARHGEF1-222	ENST00000600517	C2orf81	A6NN90	581 aa		13.33	□□□□□ -0.28
ARHGEF1-222	ENST00000600517		B4DGG1	531 aa		13.33	□□□□□ -0.28
ARHGEF1-222	ENST00000600517	GPR89A	B7ZAQ6	455 aa		13.33	□□□□□ -0.28
ARHGEF1-222	ENST00000600517	TAF4	O00268	1085 aa		13.33	□□□□□ -0.28
ARHGEF1-222	ENST00000600517	NTN3	O00634	580 aa	Predicted RBP	13.33	□□□□□ -0.28
ARHGEF1-222	ENST00000600517	CHUK	O15111	745 aa		13.33	□□□□□ -0.28
ARHGEF1-222	ENST00000600517	CASC3	O15234	703 aa	Known RBP	13.33	□□□□□ -0.28
ARHGEF1-222	ENST00000600517	GRID2	O43424	1007 aa		13.33	□□□□□ -0.28
ARHGEF1-222	ENST00000600517	BUD23	O43709	281 aa	Known RBP	13.33	□□□□□ -0.28

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