RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 PADI4Q9UM07 663 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 ZNF148Q9UQR1 794 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 JRKLQ9Y4A0 524 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 ST14Q9Y5Y6 855 aa16.6■□□□□ 0.25
SSBP4-204ENST00000597724 CPED1A4D0V7 1026 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 CEP104O60308 925 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 OPA1O60313 960 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 DNAJC6O75061 913 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 USP12O75317 370 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 ASMTLO95671 621 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 FGGP02679 453 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 CXCR5P32302 372 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 CLDN6P56747 220 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 INSM1Q01101 510 aaPredicted RBP16.59■□□□□ 0.25
SSBP4-204ENST00000597724 CTBSQ01459 385 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 ILF3Q12906 894 aaKnown RBP eCLIP16.59■□□□□ 0.25
SSBP4-204ENST00000597724 MSLNQ13421 630 aaPredicted RBP16.59■□□□□ 0.25
SSBP4-204ENST00000597724 SNX1Q13596 522 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 SPARCL1Q14515 664 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 P3H1Q32P28 736 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 PYCR3Q53H96 274 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 ZNF569Q5MCW4 686 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 MARK2Q7KZI7 788 aaKnown RBP16.59■□□□□ 0.25
SSBP4-204ENST00000597724 ARL10Q8N8L6 244 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 GPR156Q8NFN8 814 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 IFI44Q8TCB0 444 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 DTX3LQ8TDB6 740 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 MAIP1Q8WWC4 291 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 GSDMCQ9BYG8 508 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 IL26Q9NPH9 171 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 SPATS2LQ9NUQ6 558 aaKnown RBP16.59■□□□□ 0.25
SSBP4-204ENST00000597724 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.59■□□□□ 0.25
SSBP4-204ENST00000597724 GPSM3Q9Y4H4 160 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 FREM2Q5SZK8 3169 aa16.59■□□□□ 0.25
SSBP4-204ENST00000597724 ARHGEF17Q96PE2 2063 aaPredicted RBP16.58■□□□□ 0.25
SSBP4-204ENST00000597724 ASPMQ8IZT6 3477 aa16.58■□□□□ 0.25
SSBP4-204ENST00000597724 FAM149AA5PLN7 773 aa16.58■□□□□ 0.24
SSBP4-204ENST00000597724 BUD23O43709 281 aaKnown RBP16.58■□□□□ 0.24
SSBP4-204ENST00000597724 PPFIA2O75334 1257 aa16.58■□□□□ 0.24
SSBP4-204ENST00000597724 SLC25A14O95258 325 aaPredicted RBP16.58■□□□□ 0.24
SSBP4-204ENST00000597724 AK4P27144 223 aaPredicted RBP16.58■□□□□ 0.24
SSBP4-204ENST00000597724 PERM1Q5SV97 790 aa16.58■□□□□ 0.24
SSBP4-204ENST00000597724 HES3Q5TGS1 186 aa16.58■□□□□ 0.24
SSBP4-204ENST00000597724 ZDHHC20Q5W0Z9 365 aa16.58■□□□□ 0.24
SSBP4-204ENST00000597724 EFL1Q7Z2Z2 1120 aaKnown RBP16.58■□□□□ 0.24
SSBP4-204ENST00000597724 MARCH9Q86YJ5 346 aa16.58■□□□□ 0.24
SSBP4-204ENST00000597724 GALNT13Q8IUC8 556 aa16.58■□□□□ 0.24
SSBP4-204ENST00000597724 CACTIN-AS1Q8N1I8 211 aa16.58■□□□□ 0.24
SSBP4-204ENST00000597724 KYQ8NBH2 561 aa16.58■□□□□ 0.24
SSBP4-204ENST00000597724 NAT6Q93015 286 aa16.58■□□□□ 0.24
SSBP4-204ENST00000597724 GLYATL1Q969I3 302 aa16.58■□□□□ 0.24
SSBP4-204ENST00000597724 LRRC45Q96CN5 670 aa16.58■□□□□ 0.24
SSBP4-204ENST00000597724 VPS35Q96QK1 796 aa16.58■□□□□ 0.24
SSBP4-204ENST00000597724 OR2M4Q96R27 311 aa16.58■□□□□ 0.24
SSBP4-204ENST00000597724 LRRC40Q9H9A6 602 aa16.58■□□□□ 0.24
SSBP4-204ENST00000597724 RMI1Q9H9A7 625 aa16.58■□□□□ 0.24
SSBP4-204ENST00000597724 TRIM39Q9HCM9 518 aa16.58■□□□□ 0.24
SSBP4-204ENST00000597724 SIRPGQ9P1W8 387 aa16.58■□□□□ 0.24
SSBP4-204ENST00000597724 ZNHIT2Q9UHR6 403 aa16.58■□□□□ 0.24
SSBP4-204ENST00000597724 DRG1Q9Y295 367 aaKnown RBP16.58■□□□□ 0.24
SSBP4-204ENST00000597724 ZKSCAN5Q9Y2L8 839 aa16.58■□□□□ 0.24
SSBP4-204ENST00000597724 PKP3Q9Y446 797 aa16.58■□□□□ 0.24
SSBP4-204ENST00000597724 PLEKHM1Q9Y4G2 1056 aa16.58■□□□□ 0.24
SSBP4-204ENST00000597724 RP1P56715 2156 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 C2orf81A6NN90 581 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 C1QTNF9BB2RNN3 333 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 PSMD3O43242 534 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 NUAK1O60285 661 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 NOBOXO60393 691 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 C1QTNF9P0C862 333 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 JUPP14923 745 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 LPOP22079 712 aaPredicted RBP16.57■□□□□ 0.24
SSBP4-204ENST00000597724 SPAM1P38567 509 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 CAMK2BQ13554 666 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 LRP8Q14114 963 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 TAF1AQ15573 450 aaPredicted RBP16.57■□□□□ 0.24
SSBP4-204ENST00000597724 LONRF2Q1L5Z9 754 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 ATP13A5Q4VNC0 1218 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 DRICH1Q6PGQ1 229 aaPredicted RBP16.57■□□□□ 0.24
SSBP4-204ENST00000597724 UNQ6494/PRO21346Q6UXR6 183 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 PHYKPLQ8IUZ5 450 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 SFTPA2Q8IWL1 248 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 OR6C4Q8NGE1 309 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 BRSK1Q8TDC3 778 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 DPEP2Q9H4A9 486 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 ARFGAP3Q9NP61 516 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 TRMT1Q9NXH9 659 aaKnown RBP16.57■□□□□ 0.24
SSBP4-204ENST00000597724 TAAR2Q9P1P5 351 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 ATXN10Q9UBB4 475 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 FEZ2Q9UHY8 353 aaPredicted RBP16.57■□□□□ 0.24
SSBP4-204ENST00000597724 TMPRSS11EQ9UL52 423 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 PCYT1BQ9Y5K3 369 aaPredicted RBP16.57■□□□□ 0.24
SSBP4-204ENST00000597724 ARL5AQ9Y689 179 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 IGF2RP11717 2491 aa16.57■□□□□ 0.24
SSBP4-204ENST00000597724 DMXL2Q8TDJ6 3036 aa16.56■□□□□ 0.24
SSBP4-204ENST00000597724 GPR89AB7ZAQ6 455 aa16.56■□□□□ 0.24
SSBP4-204ENST00000597724 GAPDHSO14556 408 aaPredicted RBP16.56■□□□□ 0.24
SSBP4-204ENST00000597724 STX7O15400 261 aaKnown RBP16.56■□□□□ 0.24
SSBP4-204ENST00000597724 AP2A1O95782 977 aa16.56■□□□□ 0.24
SSBP4-204ENST00000597724 IFNB1P01574 187 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms