RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 PARP6Q2NL67 630 aa20.92■□□□□ 0.94
PNKP-209ENST00000596726 PYCR3Q53H96 274 aa20.92■□□□□ 0.94
PNKP-209ENST00000596726 PERM1Q5SV97 790 aa20.92■□□□□ 0.94
PNKP-209ENST00000596726 CDCP2Q5VXM1 449 aa20.92■□□□□ 0.94
PNKP-209ENST00000596726 ALS2CLQ60I27 953 aa20.92■□□□□ 0.94
PNKP-209ENST00000596726 FAM46DQ8NEK8 389 aa20.92■□□□□ 0.94
PNKP-209ENST00000596726 ATG4AQ8WYN0 398 aa20.92■□□□□ 0.94
PNKP-209ENST00000596726 NAT6Q93015 286 aa20.92■□□□□ 0.94
PNKP-209ENST00000596726 PLEKHG4BQ96PX9 1271 aa20.92■□□□□ 0.94
PNKP-209ENST00000596726 SPATA16Q9BXB7 569 aa20.92■□□□□ 0.94
PNKP-209ENST00000596726 GSDMCQ9BYG8 508 aa20.92■□□□□ 0.94
PNKP-209ENST00000596726 GULP1Q9UBP9 304 aa20.92■□□□□ 0.94
PNKP-209ENST00000596726 ZNF106Q9H2Y7 1883 aaKnown RBP20.92■□□□□ 0.94
PNKP-209ENST00000596726 BPTFQ12830 3046 aa20.91■□□□□ 0.94
PNKP-209ENST00000596726 NOBOXO60393 691 aa20.91■□□□□ 0.94
PNKP-209ENST00000596726 DNAJC6O75061 913 aa20.91■□□□□ 0.94
PNKP-209ENST00000596726 ATP1A1P05023 1023 aaKnown RBP20.91■□□□□ 0.94
PNKP-209ENST00000596726 CTBSQ01459 385 aa20.91■□□□□ 0.94
PNKP-209ENST00000596726 ILF3Q12906 894 aaKnown RBP eCLIP20.91■□□□□ 0.94
PNKP-209ENST00000596726 MSLNQ13421 630 aaPredicted RBP20.91■□□□□ 0.94
PNKP-209ENST00000596726 OLIG2Q13516 323 aa20.91■□□□□ 0.94
PNKP-209ENST00000596726 SIX1Q15475 284 aaPredicted RBP20.91■□□□□ 0.94
PNKP-209ENST00000596726 KCTD11Q693B1 232 aa20.91■□□□□ 0.94
PNKP-209ENST00000596726 DCBLD1Q8N8Z6 715 aa20.91■□□□□ 0.94
PNKP-209ENST00000596726 KDF1Q8NAX2 398 aaPredicted RBP20.91■□□□□ 0.94
PNKP-209ENST00000596726 DTX3LQ8TDB6 740 aa20.91■□□□□ 0.94
PNKP-209ENST00000596726 BLOC1S5Q8TDH9 187 aa20.91■□□□□ 0.94
PNKP-209ENST00000596726 OR2M4Q96R27 311 aa20.91■□□□□ 0.94
PNKP-209ENST00000596726 SUDS3Q9H7L9 328 aaPredicted RBP20.91■□□□□ 0.94
PNKP-209ENST00000596726 ARNT2Q9HBZ2 717 aa20.91■□□□□ 0.94
PNKP-209ENST00000596726 BPIFA1Q9NP55 256 aa20.91■□□□□ 0.94
PNKP-209ENST00000596726 SPATS2LQ9NUQ6 558 aaKnown RBP20.91■□□□□ 0.94
PNKP-209ENST00000596726 PCYT1BQ9Y5K3 369 aaPredicted RBP20.91■□□□□ 0.94
PNKP-209ENST00000596726 TMEM8BA6NDV4 472 aa20.9■□□□□ 0.94
PNKP-209ENST00000596726 METTL18O95568 372 aa20.9■□□□□ 0.94
PNKP-209ENST00000596726 ASMTLO95671 621 aa20.9■□□□□ 0.94
PNKP-209ENST00000596726 MT-CO3P00414 261 aa20.9■□□□□ 0.94
PNKP-209ENST00000596726 AK4P27144 223 aaPredicted RBP20.9■□□□□ 0.94
PNKP-209ENST00000596726 STIP1P31948 543 aaKnown RBP20.9■□□□□ 0.94
PNKP-209ENST00000596726 TARDBPQ13148 414 aaKnown RBP eCLIP20.9■□□□□ 0.94
PNKP-209ENST00000596726 ZNF569Q5MCW4 686 aa20.9■□□□□ 0.94
PNKP-209ENST00000596726 DENND5AQ6IQ26 1287 aa20.9■□□□□ 0.94
PNKP-209ENST00000596726 ARHGEF18Q6ZSZ5 1173 aa20.9■□□□□ 0.94
PNKP-209ENST00000596726 MARK2Q7KZI7 788 aaKnown RBP20.9■□□□□ 0.94
PNKP-209ENST00000596726 GLT6D1Q7Z4J2 308 aa20.9■□□□□ 0.94
PNKP-209ENST00000596726 SFTPA2Q8IWL1 248 aa20.9■□□□□ 0.94
PNKP-209ENST00000596726 GLYATL1Q969I3 302 aa20.9■□□□□ 0.94
PNKP-209ENST00000596726 APOL2Q9BQE5 337 aa20.9■□□□□ 0.94
PNKP-209ENST00000596726 KCNF1Q9H3M0 494 aa20.9■□□□□ 0.94
PNKP-209ENST00000596726 RMI1Q9H9A7 625 aa20.9■□□□□ 0.94
PNKP-209ENST00000596726 CLCA2Q9UQC9 943 aa20.9■□□□□ 0.94
PNKP-209ENST00000596726 PLEKHM1Q9Y4G2 1056 aa20.9■□□□□ 0.94
PNKP-209ENST00000596726 GPSM3Q9Y4H4 160 aa20.9■□□□□ 0.94
PNKP-209ENST00000596726 WDFY3Q8IZQ1 3526 aa20.9■□□□□ 0.94
PNKP-209ENST00000596726 IGF2RP11717 2491 aa20.89■□□□□ 0.94
PNKP-209ENST00000596726 HLTFQ14527 1009 aaKnown RBP eCLIP20.89■□□□□ 0.93
PNKP-209ENST00000596726 ZDHHC20Q5W0Z9 365 aa20.89■□□□□ 0.93
PNKP-209ENST00000596726 C17orf82Q86X59 251 aaPredicted RBP20.89■□□□□ 0.93
PNKP-209ENST00000596726 GALNT13Q8IUC8 556 aa20.89■□□□□ 0.93
PNKP-209ENST00000596726 REXO1L1PQ8IX06 675 aa20.89■□□□□ 0.93
PNKP-209ENST00000596726 OR6C4Q8NGE1 309 aa20.89■□□□□ 0.93
PNKP-209ENST00000596726 MAPK15Q8TD08 544 aa20.89■□□□□ 0.93
PNKP-209ENST00000596726 C1orf54Q8WWF1 131 aa20.89■□□□□ 0.93
PNKP-209ENST00000596726 PDLIM2Q96JY6 352 aa20.89■□□□□ 0.93
PNKP-209ENST00000596726 VPS35Q96QK1 796 aa20.89■□□□□ 0.93
PNKP-209ENST00000596726 TBL1YQ9BQ87 522 aa20.89■□□□□ 0.93
PNKP-209ENST00000596726 DPEP2Q9H4A9 486 aa20.89■□□□□ 0.93
PNKP-209ENST00000596726 TRIM39Q9HCM9 518 aa20.89■□□□□ 0.93
PNKP-209ENST00000596726 IL26Q9NPH9 171 aa20.89■□□□□ 0.93
PNKP-209ENST00000596726 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.89■□□□□ 0.93
PNKP-209ENST00000596726 TAAR2Q9P1P5 351 aa20.89■□□□□ 0.93
PNKP-209ENST00000596726 ATXN10Q9UBB4 475 aa20.89■□□□□ 0.93
PNKP-209ENST00000596726 TMPRSS11EQ9UL52 423 aa20.89■□□□□ 0.93
PNKP-209ENST00000596726 FREM2Q5SZK8 3169 aa20.89■□□□□ 0.93
PNKP-209ENST00000596726 TRABD2BA6NFA1 517 aa20.88■□□□□ 0.93
PNKP-209ENST00000596726 B4DGG1 531 aa20.88■□□□□ 0.93
PNKP-209ENST00000596726 NUAK1O60285 661 aa20.88■□□□□ 0.93
PNKP-209ENST00000596726 PPFIA2O75334 1257 aa20.88■□□□□ 0.93
PNKP-209ENST00000596726 SLC25A14O95258 325 aaPredicted RBP20.88■□□□□ 0.93
PNKP-209ENST00000596726 SPAM1P38567 509 aa20.88■□□□□ 0.93
PNKP-209ENST00000596726 TAF1AQ15573 450 aaPredicted RBP20.88■□□□□ 0.93
PNKP-209ENST00000596726 P3H1Q32P28 736 aa20.88■□□□□ 0.93
PNKP-209ENST00000596726 C14orf28Q4W4Y0 310 aa20.88■□□□□ 0.93
PNKP-209ENST00000596726 PDCD7Q8N8D1 485 aaKnown RBP20.88■□□□□ 0.93
PNKP-209ENST00000596726 BRSK1Q8TDC3 778 aa20.88■□□□□ 0.93
PNKP-209ENST00000596726 CCDC3Q9BQI4 270 aa20.88■□□□□ 0.93
PNKP-209ENST00000596726 ABCG4Q9H172 646 aa20.88■□□□□ 0.93
PNKP-209ENST00000596726 ARFGAP3Q9NP61 516 aa20.88■□□□□ 0.93
PNKP-209ENST00000596726 FEZ2Q9UHY8 353 aaPredicted RBP20.88■□□□□ 0.93
PNKP-209ENST00000596726 RABGEF1Q9UJ41 708 aa20.88■□□□□ 0.93
PNKP-209ENST00000596726 DMXL2Q8TDJ6 3036 aa20.88■□□□□ 0.93
PNKP-209ENST00000596726 UNC13CQ8NB66 2214 aa20.88■□□□□ 0.93
PNKP-209ENST00000596726 EPG5Q9HCE0 2579 aa20.87■□□□□ 0.93
PNKP-209ENST00000596726 GPR89AB7ZAQ6 455 aa20.87■□□□□ 0.93
PNKP-209ENST00000596726 GAPDHSO14556 408 aaPredicted RBP20.87■□□□□ 0.93
PNKP-209ENST00000596726 BUD23O43709 281 aaKnown RBP20.87■□□□□ 0.93
PNKP-209ENST00000596726 USP12O75317 370 aa20.87■□□□□ 0.93
PNKP-209ENST00000596726 GPR89BP0CG08 455 aa20.87■□□□□ 0.93
PNKP-209ENST00000596726 ZNF8P17098 575 aaPredicted RBP20.87■□□□□ 0.93
PNKP-209ENST00000596726 PEX6Q13608 980 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms