RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 NYAP1Q6ZVC0 841 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 B4GALNT4Q76KP1 1039 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 KDELC2Q7Z4H8 507 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 ZDHHC1Q8WTX9 485 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 GFM1Q96RP9 751 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 AGAP2Q99490 1192 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 DESI2Q9BSY9 194 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 SPATA16Q9BXB7 569 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 SUDS3Q9H7L9 328 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 SYNDIG1Q9H7V2 258 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 POLR1BQ9H9Y6 1135 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 GPSM3Q9Y4H4 160 aa17.61■□□□□ 0.41
SHKBP1-204ENST00000594862 LOC400499M0QZD8 3231 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 D6RAR5 112 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 INPP4BO15327 924 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 ARHGAP6O43182 974 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 KRT86O43790 486 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 NRDCO43847 1150 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 PPFIA2O75334 1257 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 RBP3P10745 1247 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 SLC2A4P14672 509 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 HMGCLP35914 325 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 ACTR1BP42025 376 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 POLD2P49005 469 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 ACTR1AP61163 376 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 CTBSQ01459 385 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 SLC30A9Q6PML9 568 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 C17orf82Q86X59 251 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 PHYKPLQ8IUZ5 450 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 CCNJLQ8IV13 435 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 CCL4L1Q8NHW4 92 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 SNIP1Q8TAD8 396 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 DTX3LQ8TDB6 740 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 ALG3Q92685 438 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 ZNF578Q96N58 590 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 TMEM74Q96NL1 305 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 WDR24Q96S15 920 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 STRADBQ9C0K7 418 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 CARD9Q9H257 536 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 UBP1Q9NZI7 540 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 LRIT1Q9P2V4 623 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 SHOC2Q9UQ13 582 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 RAXQ9Y2V3 346 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 TMEM98Q9Y2Y6 226 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 AAR2Q9Y312 384 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 PCDHB1Q9Y5F3 818 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 ACACAQ13085 2346 aa17.6■□□□□ 0.41
SHKBP1-204ENST00000594862 A0A087WV48 116 aa17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 RRP8O43159 456 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 BRINP1O60477 761 aa17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 SLC4A1P02730 911 aa17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 FUCA1P04066 466 aa17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 RPLP0P05388 317 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 PYGMP11217 842 aa17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 RBL1P28749 1068 aa17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 ERVPABLB-1P60509 514 aa17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 GABREP78334 506 aa17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 TBC1D25Q3MII6 688 aa17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 DARS2Q6PI48 645 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 ZNF438Q7Z4V0 828 aa17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 SPRED1Q7Z699 444 aa17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 TRIM74Q86UV6 250 aa17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 NRROSQ86YC3 692 aa17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 AVL9Q8NBF6 648 aa17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 IPMKQ8NFU5 416 aa17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 WDR36Q8NI36 951 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 FGF11Q92914 225 aa17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 LIN37Q96GY3 246 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 LRRN3Q9H3W5 708 aa17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 SPATS2LQ9NUQ6 558 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 PCDHGA8Q9Y5G5 932 aa17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 ENTPD2Q9Y5L3 495 aa17.59■□□□□ 0.41
SHKBP1-204ENST00000594862 COL27A1Q8IZC6 1860 aaPredicted RBP17.58■□□□□ 0.41
SHKBP1-204ENST00000594862 CCDC187A0A096LP49 1063 aa17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 RHPN2P1A8MT19 583 aa17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 FADS2P1A8MWK0 482 aa17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 PIRTP0C851 137 aa17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 GPR3P46089 330 aa17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 NR1D2Q14995 579 aa17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 SLC1A5Q15758 541 aa17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 SIRPB2Q5JXA9 342 aa17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 ALS2CLQ60I27 953 aa17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 LRRC69Q6ZNQ3 347 aa17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 MARK2Q7KZI7 788 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 GPR26Q8NDV2 337 aa17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 GLYATL1Q969I3 302 aa17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 TMEM159Q96B96 161 aa17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 EID2BQ96D98 161 aa17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 OXNAD1Q96HP4 312 aaPredicted RBP17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 MRGPRX2Q96LB1 330 aa17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 SPATA13Q96N96 652 aa17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 VPS35Q96QK1 796 aa17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 STN1Q9H668 368 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 TRIM39Q9HCM9 518 aa17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 THSD1Q9NS62 852 aa17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 ZNHIT2Q9UHR6 403 aa17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 CNOT6Q9ULM6 557 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 RNF215Q9Y6U7 377 aa17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 ADAMTS20P59510 1910 aa17.58■□□□□ 0.4
SHKBP1-204ENST00000594862 SMG1Q96Q15 3661 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms