RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 ZNF653Q96CK0 615 aa16.01■□□□□ 0.15
SREBF1-221ENST00000583080 PSMG3-AS1Q96PY0 264 aa16.01■□□□□ 0.15
SREBF1-221ENST00000583080 ZPBPQ9BS86 351 aa16.01■□□□□ 0.15
SREBF1-221ENST00000583080 EFHD1Q9BUP0 239 aa16.01■□□□□ 0.15
SREBF1-221ENST00000583080 TBC1D10AQ9BXI6 508 aa16.01■□□□□ 0.15
SREBF1-221ENST00000583080 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.01■□□□□ 0.15
SREBF1-221ENST00000583080 CNOT8Q9UFF9 292 aaKnown RBP16.01■□□□□ 0.15
SREBF1-221ENST00000583080 ZNHIT2Q9UHR6 403 aa16.01■□□□□ 0.15
SREBF1-221ENST00000583080 MN1Q10571 1320 aaPredicted RBP16■□□□□ 0.15
SREBF1-221ENST00000583080 ZNF106Q9H2Y7 1883 aaKnown RBP16■□□□□ 0.15
SREBF1-221ENST00000583080 POLR1CO15160 346 aaPredicted RBP16■□□□□ 0.15
SREBF1-221ENST00000583080 SNX2O60749 519 aa16■□□□□ 0.15
SREBF1-221ENST00000583080 MAN1A1P33908 653 aa16■□□□□ 0.15
SREBF1-221ENST00000583080 ARL4AP40617 200 aa16■□□□□ 0.15
SREBF1-221ENST00000583080 CDH6P55285 790 aa16■□□□□ 0.15
SREBF1-221ENST00000583080 GFERP55789 205 aa16■□□□□ 0.15
SREBF1-221ENST00000583080 MC1RQ01726 317 aa16■□□□□ 0.15
SREBF1-221ENST00000583080 KLRB1Q12918 225 aa16■□□□□ 0.15
SREBF1-221ENST00000583080 E4F1Q66K89 784 aaPredicted RBP16■□□□□ 0.15
SREBF1-221ENST00000583080 HIST2H2BCQ6DN03 193 aa16■□□□□ 0.15
SREBF1-221ENST00000583080 IYDQ6PHW0 289 aa16■□□□□ 0.15
SREBF1-221ENST00000583080 HSD3B7Q9H2F3 369 aa16■□□□□ 0.15
SREBF1-221ENST00000583080 CNOT6Q9ULM6 557 aaKnown RBP16■□□□□ 0.15
SREBF1-221ENST00000583080 KCNMB2Q9Y691 235 aa16■□□□□ 0.15
SREBF1-221ENST00000583080 RPS6KL1Q9Y6S9 549 aa16■□□□□ 0.15
SREBF1-221ENST00000583080 SPTBN1Q01082 2364 aaKnown RBP16■□□□□ 0.15
SREBF1-221ENST00000583080 FADS2P1A8MWK0 482 aa15.99■□□□□ 0.15
SREBF1-221ENST00000583080 PYGLP06737 847 aa15.99■□□□□ 0.15
SREBF1-221ENST00000583080 FURINP09958 794 aa15.99■□□□□ 0.15
SREBF1-221ENST00000583080 ZNF30P17039 623 aa15.99■□□□□ 0.15
SREBF1-221ENST00000583080 EPHA4P54764 986 aa15.99■□□□□ 0.15
SREBF1-221ENST00000583080 MLLT10P55197 1068 aa15.99■□□□□ 0.15
SREBF1-221ENST00000583080 DSC2Q02487 901 aa15.99■□□□□ 0.15
SREBF1-221ENST00000583080 SEPT6Q14141 434 aa15.99■□□□□ 0.15
SREBF1-221ENST00000583080 CRTC2Q53ET0 693 aaPredicted RBP15.99■□□□□ 0.15
SREBF1-221ENST00000583080 PPP1R2P3Q6NXS1 205 aa15.99■□□□□ 0.15
SREBF1-221ENST00000583080 NLRP8Q86W28 1048 aa15.99■□□□□ 0.15
SREBF1-221ENST00000583080 ESX1Q8N693 406 aa15.99■□□□□ 0.15
SREBF1-221ENST00000583080 TEX26Q8N6G2 289 aa15.99■□□□□ 0.15
SREBF1-221ENST00000583080 ANKRD20A12PQ8NF67 263 aa15.99■□□□□ 0.15
SREBF1-221ENST00000583080 EXD1Q8NHP7 514 aa15.99■□□□□ 0.15
SREBF1-221ENST00000583080 NSMCE1Q8WV22 266 aa15.99■□□□□ 0.15
SREBF1-221ENST00000583080 WDR24Q96S15 920 aa15.99■□□□□ 0.15
SREBF1-221ENST00000583080 HERPUD2Q9BSE4 406 aa15.99■□□□□ 0.15
SREBF1-221ENST00000583080 TRIT1Q9H3H1 467 aaKnown RBP15.99■□□□□ 0.15
SREBF1-221ENST00000583080 STN1Q9H668 368 aaKnown RBP15.99■□□□□ 0.15
SREBF1-221ENST00000583080 VPS18Q9P253 973 aa15.99■□□□□ 0.15
SREBF1-221ENST00000583080 MYO1AQ9UBC5 1043 aa15.99■□□□□ 0.15
SREBF1-221ENST00000583080 CROTQ9UKG9 612 aa15.99■□□□□ 0.15
SREBF1-221ENST00000583080 UTP20O75691 2785 aaKnown RBP15.99■□□□□ 0.15
SREBF1-221ENST00000583080 LRRC53A6NM62 1247 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 MFSD11O43934 449 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 CLDN7O95471 211 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 FTLP02792 175 aaPredicted RBP15.98■□□□□ 0.15
SREBF1-221ENST00000583080 CCDC172P0C7W6 258 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 RARAP10276 462 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 F3P13726 295 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 PCK1P35558 622 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 DLSTP36957 453 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 CD97P48960 835 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 EPHB1P54762 984 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 MYL5Q02045 173 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 FOXM1Q08050 763 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 ITKQ08881 620 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 MAP7Q14244 749 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 ZNF571Q7Z3V5 609 aaPredicted RBP15.98■□□□□ 0.15
SREBF1-221ENST00000583080 TMEM135Q86UB9 458 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 SLC9B2Q86UD5 537 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 SH3KBP1Q96B97 665 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 TDRD1Q9BXT4 1180 aaKnown RBP15.98■□□□□ 0.15
SREBF1-221ENST00000583080 ULBP3Q9BZM4 244 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 POLR1EQ9GZS1 481 aaKnown RBP15.98■□□□□ 0.15
SREBF1-221ENST00000583080 HAUS4Q9H6D7 363 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 PCDH18Q9HCL0 1135 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 PRDM8Q9NQV8 689 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 OGFRQ9NZT2 677 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 CPNE7Q9UBL6 633 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 CHKBQ9Y259 395 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 KCTD3Q9Y597 815 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 ICE1Q9Y2F5 2266 aa15.98■□□□□ 0.15
SREBF1-221ENST00000583080 NOTCH2Q04721 2471 aa15.97■□□□□ 0.15
SREBF1-221ENST00000583080 LILRA5A6NI73 299 aa15.97■□□□□ 0.15
SREBF1-221ENST00000583080 DDX3XO00571 662 aaKnown RBP eCLIP15.97■□□□□ 0.15
SREBF1-221ENST00000583080 PRLP01236 227 aa15.97■□□□□ 0.15
SREBF1-221ENST00000583080 KRT7P08729 469 aa15.97■□□□□ 0.15
SREBF1-221ENST00000583080 ANKRD34CP0C6C1 535 aa15.97■□□□□ 0.15
SREBF1-221ENST00000583080 SERPINB6P35237 376 aa15.97■□□□□ 0.15
SREBF1-221ENST00000583080 UQCRFS1P47985 274 aa15.97■□□□□ 0.15
SREBF1-221ENST00000583080 UBE2IP63279 158 aaKnown RBP15.97■□□□□ 0.15
SREBF1-221ENST00000583080 SH3BP2P78314 561 aa15.97■□□□□ 0.15
SREBF1-221ENST00000583080 ERV3-1Q14264 604 aa15.97■□□□□ 0.15
SREBF1-221ENST00000583080 ASIC2Q16515 512 aa15.97■□□□□ 0.15
SREBF1-221ENST00000583080 HENMT1Q5T8I9 393 aaKnown RBP15.97■□□□□ 0.15
SREBF1-221ENST00000583080 RBM43Q6ZSC3 357 aaKnown RBP15.97■□□□□ 0.15
SREBF1-221ENST00000583080 LYSMD3Q7Z3D4 306 aa15.97■□□□□ 0.15
SREBF1-221ENST00000583080 NDUFAF2Q8N183 169 aa15.97■□□□□ 0.15
SREBF1-221ENST00000583080 GALNT6Q8NCL4 622 aa15.97■□□□□ 0.15
SREBF1-221ENST00000583080 LPCAT1Q8NF37 534 aa15.97■□□□□ 0.15
SREBF1-221ENST00000583080 ARFGAP3Q9NP61 516 aa15.97■□□□□ 0.15
SREBF1-221ENST00000583080 CHMP5Q9NZZ3 219 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms